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Youping Deng, PhD

TitleCo-Director, Genomics and Bioinformatics Shared Resource
Faculty RankProfessor
InstitutionUniversity of Hawaii at Manoa
DepartmentQuantitative Health Sciences
AddressJohn A. Burns School of Medicine
University of Hawaii at Manoa
651 Ilalo Street
Honolulu HI 96813
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    R21CA164764     (DENG, YOUPING)Feb 11, 2013 - Jan 31, 2016
    NIH
    EARLY DETECTION OF LUNG CANCER USING METABOLOMIC LIPID PROFILING
    Role: Principal Investigator
    R01CA223490     (DENG, YOUPING)Sep 1, 2018 - Aug 31, 2023
    NIH
    Profiling genome-wide circulating ncRNAs for the early detection of lung cancer
    Role: Principal Investigator
    R01CA230514     (DENG, YOUPING)Aug 1, 2019 - Jul 31, 2024
    NIH
    Circulating lipid and miRNA markers for early detection of breast cancer among women with abnormal mammograms
    Role: Principal Investigator
    T32DK137523     (DENG, YOUPING)Sep 1, 2023 - Aug 31, 2028
    NIH
    The Hawaii Advanced Training in Artificial Intelligence for Precision Nutrition Science Research (AIPrN)
    Role: Principal Investigator
    U54HG013243     (WU, LANG)Sep 15, 2023 - May 31, 2028
    NIH
    Pacific Center for Genome Research
    Role: Co-Principal Investigator
    UE5HG013826     (DENG, YOUPING)Sep 17, 2024 - Aug 31, 2027
    NIH
    Pacific Computational Genomics and Data Sciences Research Education Program
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Feng Z, Nasu M, Devendra G, Abdul-Ghani AA, Chan OTM, Borgia JA, Gao Z, Zhang H, Chen Y, Gong T, Luo G, Yang H, Wu L, Fu Y, Deng Y. Liquid biopsy diagnostics for non-small cell lung cancer via elucidation of tRNA signatures. Commun Med (Lond). 2025 Aug 21; 5(1):364. PMID: 40841456.
      Citations:    
    2. Gao Z, Nasu M, Devendra G, Abdul-Ghani AA, Herrera AJ, Borgia JA, Seder CW, Kuehu DL, Feng Z, Chen Y, Gong T, Zhang Z, Chan O, Yang H, Yu J, Fu Y, Wu L, Deng Y. A robust machine learning model based on ribosomal-subunit-derived piRNAs for diagnostic potential of nonsmall cell lung cancer across multicentre, large-scale of sequencing data. Clin Transl Med. 2025 Aug; 15(8):e70418. PMID: 40714929.
      Citations: 1     Fields:    Translation:Humans
    3. Maison DP, Khadka VS, Mohd-Ibrahim I, Peluso MJ, Henrich TJ, Deng Y, Gerschenson M. Peripheral immune progression to long COVID is associated with mitochondrial gene transcription: A meta-analysis. Mitochondrion. 2025 Nov; 85:102072. PMID: 40738238.
      Citations:    Fields:    
    4. Higa L, Deng Y. Highlighting the achievements and impact of women in data science. Patterns (N Y). 2025 Jun 13; 6(6):101263. PMID: 40575125.
      Citations:    
    5. Fan YT, Deng YB. Effects of maternal anti-Ro/La antibodies on fetal atrioventricular conduction evaluated with echocardiography: a state-of-the-art review. Arch Gynecol Obstet. 2025 Sep; 312(3):733-744. PMID: 40500420.
      Citations:    Fields:    Translation:Humans
    6. Huang Z, Cheng XQ, Liu K, Xiong L, Bi XJ, Deng YB. A simplified approach for prediction of stroke risk in asymptomatic carotid atherosclerosis. Acta Radiol. 2025 Oct; 66(10):1085-1093. PMID: 40495670.
      Citations:    Fields:    
    7. Huang Z, Cheng XQ, Lu RR, Liu YN, Bi XJ, Deng YB. Correlation of plaque vulnerability stratified by Carotid Plaque-Reporting and Data System with outcomes of endarterectomy vs stenting. J Vasc Surg. 2025 Oct; 82(4):1299-1310.e2. PMID: 40505824.
      Citations:    Fields:    Translation:Humans
    8. Gao YP, Liu HY, Bi XJ, Sun J, Zhu Y, Zhou W, Fan YT, Cheng XQ, Huang PN, Liu YN, Deng YB. H2FPEF and HFA-PEFF scores for heart failure risk stratification in hypertrophic cardiomyopathy patients. ESC Heart Fail. 2025 Jun; 12(3):2225-2238. PMID: 40022558.
      Citations: 1     Fields:    Translation:Humans
    9. Maison DP, Tasissa H, Deitchman A, Peluso MJ, Deng Y, Miller FD, Henrich TJ, Gerschenson M. COVID-19 clinical presentation, management, and epidemiology: a concise compendium. Front Public Health. 2025; 13:1498445. PMID: 39957982.
      Citations: 6     Fields:    Translation:HumansCellsPHPublic Health
    10. Panee J, Qin Y, Deng Y. Associations of Chronic Marijuana Use with Changes in Salivary Microbiome. Microorganisms. 2024 Nov 06; 12(11). PMID: 39597633.
      Citations:    
    11. Chen S, Liu F, Fu Y, Deng CK, Borgia JA, Ayman AG, Nasu M, Jijiwa M, Yang H, Gong T, Wang J, Ling Z, Wang X, Wang H, Chu Q, Deng Y. A prospective multi-cohort study identifies and validates a 5-gene peripheral blood signature predictive of immunotherapy response in non-small cell lung cancer. Mol Cancer. 2024 Nov 06; 23(1):247. PMID: 39506771.
      Citations: 3     Fields:    Translation:HumansCells
    12. Huang Z, Cheng XQ, Lu RR, Bi XJ, Liu YN, Deng YB. Incremental Prognostic Value of Carotid?Plaque-RADS Over Stenosis Degree in Relation to Stroke Risk. JACC Cardiovasc Imaging. 2025 Jan; 18(1):77-89. PMID: 39243231.
      Citations: 3     Fields:    Translation:Humans
    13. Qin Y, Maggio A, Hawkins D, Beaudry L, Kim A, Pan D, Gong T, Fu Y, Yang H, Deng Y. Whole-genome bisulfite sequencing data analysis learning module on Google Cloud Platform. Brief Bioinform. 2024 Jul 23; 25(Supplement_1). PMID: 39041913.
      Citations: 3     Fields:    Translation:HumansCells
    14. Huang Z, Cheng XQ, Lu RR, Gao YP, Lv WZ, Liu K, Liu YN, Xiong L, Bi XJ, Deng YB. A Radiomics-Based Nomogram Using Ultrasound Carotid Plaque Evaluation For Predicting Cerebro-Cardiovascular Events In Asymptomatic Patients. Acad Radiol. 2024 12; 31(12):5204-5216. PMID: 38908923.
      Citations:    Fields:    Translation:Humans
    15. Feng Z, Fu Y, Deng Y. Enhancing visibility and inclusivity of queer scientists to advance equality in academia. Patterns (N Y). 2024 Jun 14; 5(6):101008. PMID: 39005484.
      Citations:    
    16. Huang PN, Liu YN, Cheng XQ, Liu HY, Zhang J, Li L, Sun J, Gao YP, Lu RR, Gao YP, Deng YB. Relative apical sparing obtained with speckle tracking echocardiography is not a sensitive parameter for diagnosing light-chain cardiac amyloidosis. Quant Imaging Med Surg. 2024 Mar 15; 14(3):2357-2369. PMID: 38545064.
      Citations:    
    17. Chen Y, Gao Z, Mohd-Ibrahim I, Yang H, Wu L, Fu Y, Deng Y. Pan-cancer analyses of bromodomain containing 9 as a novel therapeutic target reveals its diagnostic, prognostic potential and biological mechanism in human tumours. Clin Transl Med. 2024 02; 14(2):e1543. PMID: 38303608.
      Citations: 8     Fields:    Translation:HumansCells
    18. Gao YP, Deng YB. Ultrasound evaluation of the cardiovascular system in offspring conceived through assisted reproductive technology. J Assist Reprod Genet. 2024 Mar; 41(3):623-634. PMID: 38244152.
      Citations: 1     Fields:    
    19. Lu SR, Zhu Y, Zhou W, Zhang J, Deng YB, Liu YN. Incremental prognostic utility of left ventricular and left atrial strains in coronary artery disease patients with reduced systolic function. Echocardiography. 2024 Jan; 41(1):e15740. PMID: 38284688.
      Citations: 1     Fields:    Translation:Humans
    20. Huang X, Fan XY, Cheng Q, Zhang J, Sun J, Tang QY, Deng YB, Bi XJ. Intrinsic Wave Velocity Propagation: A Novel Parameter for Assessing the Effect of Anthracycline Chemotherapy Agents on Cardiac Diastolic Function in Breast Cancer Patients. Curr Med Sci. 2023 Dec; 43(6):1229-1237. PMID: 38041790.
      Citations: 2     Fields:    Translation:Humans
    21. Liu S, Zhong H, Zhu J, Wu Y, Deng Y, Wu L. Regulome-wide association study identifies genetically driven accessible regions associated with pancreatic cancer risk. Int J Cancer. 2024 Feb 15; 154(4):670-678. PMID: 37850323.
      Citations: 2     Fields:    Translation:HumansCells
    22. Fu Y, Wu K, Wang Z, Yang H, Chen Y, Wu L, Yanagihara R, Hedges JR, Wang H, Deng Y. Effectiveness of various COVID-19 vaccine regimens among 10.4 million patients from the National COVID Cohort Collaborative during Pre-Delta to Omicron periods - United States, 11 December 2020 to 30 June 2022. Vaccine. 2023 10 06; 41(42):6339-6349. PMID: 37741761.
      Citations: 1     Fields:    Translation:HumansCells
    23. Maison DP, Deng Y, Gerschenson M. SARS-CoV-2 and the host-immune response. Front Immunol. 2023; 14:1195871. PMID: 37404823.
      Citations: 14     Fields:    Translation:HumansCells
    24. Abbasian MH, Mahmanzar M, Rahimian K, Mahdavi B, Tokhanbigli S, Moradi B, Sisakht MM, Deng Y. Global landscape of SARS-CoV-2 mutations and conserved regions. J Transl Med. 2023 02 25; 21(1):152. PMID: 36841805.
      Citations: 46     Fields:    Translation:HumansCells
    25. Huang Z, Cheng XQ, Liu YN, Bi XJ, Deng YB. Value of Intraplaque Neovascularization on Contrast-Enhanced Ultrasonography in Predicting Ischemic Stroke Recurrence in Patients With Carotid Atherosclerotic Plaque. Korean J Radiol. 2023 04; 24(4):338-348. PMID: 36907591.
      Citations: 6     Fields:    Translation:Humans
    26. Wang JY, Liu K, Wang YB, Deng YB, Sun J. Effects of norepinephrine on plaque hypoxia in atherosclerotic rabbits. Front Cardiovasc Med. 2023; 10:1121413. PMID: 36873394.
      Citations:    
    27. Fan XY, Huang X, Cheng Q, Zhang J, Sun J, Tang QY, Deng YB, Bi XJ. Quantitative Assessment of Right Ventricular Function in Patients With Systemic Lupus Erythematosus Using the Novel Non-invasive Pressure-Strain Loop. Ultrasound Med Biol. 2023 05; 49(5):1337-1344. PMID: 36792436.
      Citations: 2     Fields:    Translation:Humans
    28. Yang WS, Caliva MJ, Khadka VS, Tiirikainen M, Matter ML, Deng Y, Ramos JW. RSK1 and RSK2 serine/threonine kinases regulate different transcription programs in cancer. Front Cell Dev Biol. 2022; 10:1015665. PMID: 36684450.
      Citations:    
    29. Chen Y, Qin Y, Fu Y, Gao Z, Deng Y. Integrated Analysis of Bulk RNA-Seq and Single-Cell RNA-Seq Unravels the Influences of SARS-CoV-2 Infections to Cancer Patients. Int J Mol Sci. 2022 Dec 10; 23(24). PMID: 36555339.
      Citations: 2     Fields:    Translation:HumansCells
    30. Ghaleh SS, Rahimian K, Mahmanzar M, Mahdavi B, Tokhanbigli S, Sisakht MM, Farhadi A, Bakhtiari MM, Kuehu DL, Deng Y. SARS-CoV-2 Non-structural protein 1(NSP1) mutation virulence and natural selection: Evolutionary trends in the six continents. Virus Res. 2023 Jan 02; 323:199016. PMID: 36473671.
      Citations: 9     Fields:    
    31. Wang JY, Sun J, Deng YB, Wang YB, Liu K. Effects of Norepinephrine on Renal Cortical and Medullary Blood Flow in Atherosclerotic Rabbits. Curr Med Sci. 2022 Dec; 42(6):1172-1177. PMID: 36083378.
      Citations:    Fields:    Translation:Animals
    32. Mahmanzar M, Houseini ST, Rahimian K, Namini AM, Gholamzad A, Tokhanbigli S, Sisakht MM, Farhadi A, Kuehu DL, Deng Y. The First Geographic Identification by Country of Sustainable Mutations of SARS-COV2 Sequence Samples: Worldwide Natural Selection Trends. bioRxiv. 2022 Jul 19. PMID: 35898341.
      Citations:    
    33. Adhikari B, Lee CN, Khadka VS, Deng Y, Fukumoto G, Thorne M, Caires K, Odani J, Mishra B. RNA-Sequencing based analysis of bovine endometrium during the maternal recognition of pregnancy. BMC Genomics. 2022 Jul 07; 23(1):494. PMID: 35799127.
      Citations: 12     Fields:    Translation:Animals
    34. Gao Z, Jijiwa M, Nasu M, Borgard H, Gong T, Xu J, Chen S, Fu Y, Chen Y, Hu X, Huang G, Deng Y. Comprehensive landscape of tRNA-derived fragments in lung cancer. Mol Ther Oncolytics. 2022 Sep 15; 26:207-225. PMID: 35892120.
      Citations:    
    35. Fu Y, Hu L, Ren HW, Zuo Y, Chen S, Zhang QS, Shao C, Ma Y, Wu L, Hao JJ, Wang CZ, Wang Z, Yanagihara R, Deng Y. Corrigendum to "Prognostic Factors for COVID-19 Hospitalized Patients with Preexisting Type 2 Diabetes". Int J Endocrinol. 2022; 2022:9838923. PMID: 35833192.
      Citations:    
    36. Gao LY, Ran HT, Deng YB, Luo BM, Zhou P, Chen W, Zhang YH, Li JC, Wang HY, Jiang YX. Gail model and fifth edition of ultrasound BI-RADS help predict axillary lymph node metastasis in breast cancer-A multicenter prospective study. Asia Pac J Clin Oncol. 2023 Apr; 19(2):e71-e79. PMID: 35593663.
      Citations: 1     Fields:    Translation:Humans
    37. Chen S, Gao Z, Hu L, Zuo Y, Fu Y, Wei M, Zitello E, Huang G, Deng Y. Association of Septic Shock with Mortality in Hospitalized COVID-19 Patients in Wuhan, China. Adv Virol. 2022; 2022:3178283. PMID: 35502304.
      Citations:    
    38. Gao YP, Zhou W, Huang PN, Liu HY, Bi XJ, Zhu Y, Sun J, Tang QY, Li L, Zhang J, Zhu WH, Cheng XQ, Liu YN, Deng YB. Persistent Endothelial Dysfunction in Coronavirus Disease-2019 Survivors Late After Recovery. Front Med (Lausanne). 2022; 9:809033. PMID: 35237624.
      Citations:    
    39. Urena F, Ma C, Hoffmann FW, Nunes LGA, Urschitz J, Moisyadi S, Khadka VS, Deng Y, Hoffmann PR. T-cell activation decreases miRNA-15a/16 levels to promote MEK1-ERK1/2-Elk1 signaling and proliferative capacity. J Biol Chem. 2022 03; 298(3):101634. PMID: 35085550.
      Citations: 6     Fields:    Translation:AnimalsCells
    40. Gong T, Borgard H, Zhang Z, Chen S, Gao Z, Deng Y. Analysis and Performance Assessment of the Whole Genome Bisulfite Sequencing Data Workflow: Currently Available Tools and a Practical Guide to Advance DNA Methylation Studies. Small Methods. 2022 03; 6(3):e2101251. PMID: 35064762.
      Citations: 24     Fields:    Translation:HumansCells
    41. Fu Y, Hu L, Ren HW, Zuo Y, Chen S, Zhang QS, Shao C, Ma Y, Wu L, Hao JJ, Wang CZ, Wang Z, Yanagihara R, Deng Y. Prognostic Factors for COVID-19 Hospitalized Patients with Preexisting Type 2 Diabetes. Int J Endocrinol. 2022; 2022:9322332. PMID: 35047039.
      Citations:    
    42. Foox J, Nordlund J, Lalancette C, Gong T, Lacey M, Lent S, Langhorst BW, Ponnaluri VKC, Williams L, Padmanabhan KR, Cavalcante R, Lundmark A, Butler D, Mozsary C, Gurvitch J, Greally JM, Suzuki M, Menor M, Nasu M, Alonso A, Sheridan C, Scherer A, Bruinsma S, Golda G, Muszynska A, Labaj PP, Campbell MA, Wos F, Raine A, Liljedahl U, Axelsson T, Wang C, Chen Z, Yang Z, Li J, Yang X, Wang H, Melnick A, Guo S, Blume A, Franke V, de Caceres II, Rodriguez-Antolin C, Rosas R, Davis JW, Ishii J, Megherbi DB, Xiao W, Liao W, Xu J, Hong H, Ning B, Tong W, Akalin A, Wang Y, Deng Y, Mason CE. Author Correction: The SEQC2 epigenomics quality control (EpiQC) study. Genome Biol. 2021 Dec 23; 22(1):350. PMID: 34949218.
      Citations: 1     Fields:    
    43. Foox J, Nordlund J, Lalancette C, Gong T, Lacey M, Lent S, Langhorst BW, Ponnaluri VKC, Williams L, Padmanabhan KR, Cavalcante R, Lundmark A, Butler D, Mozsary C, Gurvitch J, Greally JM, Suzuki M, Menor M, Nasu M, Alonso A, Sheridan C, Scherer A, Bruinsma S, Golda G, Muszynska A, Labaj PP, Campbell MA, Wos F, Raine A, Liljedahl U, Axelsson T, Wang C, Chen Z, Yang Z, Li J, Yang X, Wang H, Melnick A, Guo S, Blume A, Franke V, Ibanez de Caceres I, Rodriguez-Antolin C, Rosas R, Davis JW, Ishii J, Megherbi DB, Xiao W, Liao W, Xu J, Hong H, Ning B, Tong W, Akalin A, Wang Y, Deng Y, Mason CE. The SEQC2 epigenomics quality control (EpiQC) study. Genome Biol. 2021 12 06; 22(1):332. PMID: 34872606.
      Citations: 26     Fields:    Translation:HumansCells
    44. Gao YP, Zhou W, Huang PN, Liu HY, Bi XJ, Zhu Y, Sun J, Tang QY, Li L, Zhang J, Sun RY, Cheng XQ, Liu YN, Deng YB. Normalized Cardiac Structure and Function in COVID-19 Survivors Late After Recovery. Front Cardiovasc Med. 2021; 8:756790. PMID: 34912863.
      Citations:    
    45. Huang Z, Cheng XQ, Liu HY, Bi XJ, Liu YN, Lv WZ, Xiong L, Deng YB. Relation of Carotid Plaque Features Detected with Ultrasonography-Based Radiomics to Clinical Symptoms. Transl Stroke Res. 2022 12; 13(6):970-982. PMID: 34741749.
      Citations: 14     Fields:    Translation:Humans
    46. Zitello E, Hernandez B, Deng Y. Viral Etiology of Solid Tumors and Immunotherapy. Gastroenterology. 2022 02; 162(2):659-660. PMID: 34582894.
      Citations:    Fields:    Translation:Humans
    47. Sah N, Kuehu DL, Khadka VS, Deng Y, Jha R, Wasti S, Mishra B. RNA sequencing-based analysis of the magnum tissues revealed the novel genes and biological pathways involved in the egg-white formation in the laying hen. BMC Genomics. 2021 May 01; 22(1):318. PMID: 33932994.
      Citations: 7     Fields:    Translation:HumansAnimals
    48. Chen Y, Zitello E, Guo R, Deng Y. The function of LncRNAs and their role in the prediction, diagnosis, and prognosis of lung cancer. Clin Transl Med. 2021 04; 11(4):e367. PMID: 33931980.
      Citations: 61     Fields:    Translation:Humans
    49. Niu Z, Tian JW, Ran HT, Ren WD, Chang C, Yuan JJ, Kang CS, Deng YB, Wang H, Luo BM, Guo SL, Zhou Q, Xue ES, Zhan WW, Zhou Q, Li J, Zhou P, Zhang CQ, Chen M, Gu Y, Xu JF, Chen W, Zhang YH, Wang HQ, Li JC, Wang HY, Jiang YX. Risk-predicted dual nomograms consisting of clinical and ultrasound factors for downgrading BI-RADS category 4a breast lesions - A multiple centre study. J Cancer. 2021; 12(1):292-304. PMID: 33391426.
      Citations:    
    50. Gao LY, Gu Y, Tian JW, Ran HT, Ren WD, Chang C, Yuan JJ, Kang CS, Deng YB, Luo BM, Zhou Q, Zhan WW, Zhou Q, Li J, Zhou P, Zhang CQ, Chen M, Gu Y, Guo JF, Chen W, Zhang YH, Li JC, Wang HY, Jiang YX. Gail Model Improves the Diagnostic Performance of the Fifth Edition of Ultrasound BI-RADS for Predicting Breast Cancer: A Multicenter Prospective Study. Acad Radiol. 2022 01; 29 Suppl 1:S1-S7. PMID: 33384211.
      Citations: 8     Fields:    Translation:Humans
    51. Rodriguez RM, Khadka VS, Menor M, Hernandez BY, Deng Y. Tissue-associated microbial detection in cancer using human sequencing data. BMC Bioinformatics. 2020 Dec 03; 21(Suppl 9):523. PMID: 33272199.
      Citations: 8     Fields:    Translation:Humans
    52. Fu Y, Ling Z, Arabnia H, Deng Y. Current trend and development in bioinformatics research. BMC Bioinformatics. 2020 Dec 03; 21(Suppl 9):538. PMID: 33272214.
      Citations: 21     Fields:    Translation:Humans
    53. Yu Z, Fu Y, Ai J, Zhang J, Huang G, Deng Y. Development of predicitve models to distinguish metals from non-metal toxicants, and individual metal from one another. BMC Bioinformatics. 2020 Dec 03; 21(Suppl 9):239. PMID: 33272211.
      Citations: 2     Fields:    Translation:HumansAnimals
    54. Li X, Bu S, Pan RR, Zhou C, Qu K, Ying X, Zhong J, Xiao J, Yuan Q, Zhang S, Tipton L, Wang Y, Deng Y, Duan S. The values of AHCY and CBS promoter methylation on the diagnosis of cerebral infarction in Chinese Han population. BMC Med Genomics. 2020 11 02; 13(1):163. PMID: 33138824.
      Citations: 1     Fields:    Translation:HumansCells
    55. Chen X, Zhu Y, Jijiwa M, Nasu M, Ai J, Dai S, Jiang B, Zhang J, Huang G, Deng Y. Identification of plasma lipid species as promising diagnostic markers for prostate cancer. BMC Med Inform Decis Mak. 2020 09 24; 20(Suppl 9):223. PMID: 32967667.
      Citations: 10     Fields:    Translation:Humans
    56. Gu Y, Tian JW, Ran HT, Ren WD, Chang C, Yuan JJ, Kang CS, Deng YB, Wang H, Luo BM, Guo SL, Zhou Q, Xue ES, Zhan WW, Zhou Q, Li J, Zhou P, Zhang CQ, Chen M, Gu Y, Xu JF, Chen W, Zhang YH, Wang HQ, Li JC, Wang HY, Jiang YX. The Utility of the Fifth Edition of the BI-RADS Ultrasound Lexicon in Category 4 Breast Lesions: A Prospective Multicenter Study in China. Acad Radiol. 2022 01; 29 Suppl 1:S26-S34. PMID: 32768352.
      Citations: 9     Fields:    Translation:Humans
    57. Zhao T, Khadka VS, Deng Y. Identification of lncRNA biomarkers for lung cancer through integrative cross-platform data analyses. Aging (Albany NY). 2020 07 16; 12(14):14506-14527. PMID: 32675385.
      Citations: 16     Fields:    Translation:Humans
    58. Gao LY, Gu Y, Xu W, Tian JW, Yin LX, Ran HT, Ren WD, Mu YM, Zhang JY, Chang C, Yuan JJ, Kang CS, Deng YB, Wang H, Xie XY, Luo BM, Guo SL, Zhou Q, Xue ES, Zhan WW, Jiao T, Zhou Q, Li J, Zhou P, Huang PT, Xue HY, Zhang CQ, Chen M, Jing XX, Gu Y, Guo JF, Ding HY, Xu JF, Chen W, Liu L, Zhang YH, Wang HQ, Mu ZP, Li JC, Wang HY, Jiang YX. Can Combined Screening of Ultrasound and Elastography Improve Breast Cancer Identification Compared with MRI in Women with Dense Breasts-a Multicenter Prospective Study. J Cancer. 2020; 11(13):3903-3909. PMID: 32328194.
      Citations:    
    59. Li L, Deng YB, Guo LD, Liu K, Zhang J, Tang QY. Evaluation of Long-Term Impact of Pericardiectomy on Left Atrial Functions in Patients with Constrictive Pericarditis Using Speckle Tracking Echocardiography. Ultrasound Med Biol. 2020 05; 46(5):1158-1168. PMID: 32107091.
      Citations: 2     Fields:    Translation:Humans
    60. Zhou LQ, Wu XL, Huang SY, Wu GG, Ye HR, Wei Q, Bao LY, Deng YB, Li XR, Cui XW, Dietrich CF. Lymph Node Metastasis Prediction from Primary Breast Cancer US Images Using Deep Learning. Radiology. 2020 01; 294(1):19-28. PMID: 31746687.
      Citations: 130     Fields:    Translation:Humans
    61. Wu GG, Zhou LQ, Xu JW, Wang JY, Wei Q, Deng YB, Cui XW, Dietrich CF. Artificial intelligence in breast ultrasound. World J Radiol. 2019 Feb 28; 11(2):19-26. PMID: 30858931.
      Citations:    
    62. Zhou LQ, Wang JY, Yu SY, Wu GG, Wei Q, Deng YB, Wu XL, Cui XW, Dietrich CF. Artificial intelligence in medical imaging of the liver. World J Gastroenterol. 2019 Feb 14; 25(6):672-682. PMID: 30783371.
      Citations: 84     Fields:    Translation:Humans
    63. Menor M, Zhu Y, Wang Y, Zhang J, Jiang B, Deng Y. Development of somatic mutation signatures for risk stratification and prognosis in lung and colorectal adenocarcinomas. BMC Med Genomics. 2019 01 31; 12(Suppl 1):24. PMID: 30704450.
      Citations: 9     Fields:    Translation:Humans
    64. Siriwardhana C, Khadka VS, Chen JJ, Deng Y. Development of a miRNA-seq based prognostic signature in lung adenocarcinoma. BMC Cancer. 2019 Jan 08; 19(1):34. PMID: 30621620.
      Citations: 22     Fields:    Translation:HumansCells
    65. Guo M, Lu S, Huang H, Wang Y, Yang MQ, Yang Y, Fan Z, Jiang B, Deng Y. Increased AURKA promotes cell proliferation and predicts poor prognosis in bladder cancer. BMC Syst Biol. 2018 12 14; 12(Suppl 7):118. PMID: 30547784.
      Citations: 32     Fields:    Translation:HumansCells
    66. Mao YH, Deng YB, Liu YN, Wei X, Bi XJ, Tang QY, Wang YB, Wang XY. Contrast Echocardiographic Perfusion Imaging in Clinical Decision-Making for Cardiac Masses in Patients With a History of Extracardiac Malignant Tumor. JACC Cardiovasc Imaging. 2019 04; 12(4):754-756. PMID: 30448137.
      Citations: 5     Fields:    Translation:Humans
    67. Sah N, Kuehu DL, Khadka VS, Deng Y, Peplowska K, Jha R, Mishra B. RNA sequencing-based analysis of the laying hen uterus revealed the novel genes and biological pathways involved in the eggshell biomineralization. Sci Rep. 2018 11 15; 8(1):16853. PMID: 30443032.
      Citations: 31     Fields:    Translation:AnimalsCells
    68. Dou Y, Zhu Y, Ai J, Chen H, Liu H, Borgia JA, Li X, Yang F, Jiang B, Wang J, Deng Y. Plasma small ncRNA pair panels as novel biomarkers for early-stage lung adenocarcinoma screening. BMC Genomics. 2018 Jul 20; 19(1):545. PMID: 30029594.
      Citations: 15     Fields:    Translation:Humans
    69. Wang YB, Li Y, Deng YB, Liu YN, Zhang J, Sun J, Zhu Y, Li L, Tang QY, Zhou W. Enlarged Size and Impaired Elastic Properties of the Ascending Aorta are Associated with Endothelial Dysfunction and Elevated Plasma Matrix Metalloproteinase-2 Level in Patients with Bicuspid Aortic Valve. Ultrasound Med Biol. 2018 05; 44(5):955-962. PMID: 29472114.
      Citations: 8     Fields:    Translation:Humans
    70. Li Y, Deng YB, Bi XJ, Liu YN, Zhang J, Li L, Chen B. Evaluation of myocardial strain and aortic elasticity in patients with bicuspid aortic valve. J Huazhong Univ Sci Technolog Med Sci. 2016 Oct; 36(5):747-751. PMID: 27752907.
      Citations: 2     Fields:    Translation:Humans
    71. Li Y, Deng YB, Bi XJ, Liu YN, Zhang J, Li L. Evaluation of myocardial strain and artery elasticity using speckle tracking echocardiography and high-resolution ultrasound in patients with bicuspid aortic valve. Int J Cardiovasc Imaging. 2016 Jul; 32(7):1063-9. PMID: 27076219.
      Citations: 7     Fields:    Translation:Humans
    72. Yao GH, Zhang M, Yin LX, Zhang C, Xu MJ, Deng Y, Liu Y, Deng YB, Ren WD, Li ZA, Tang H, Zhang QB, Mu YM, Fang LG, Zhang Y. Doppler Echocardiographic Measurements in Normal Chinese Adults (EMINCA): a prospective, nationwide, and multicentre study. Eur Heart J Cardiovasc Imaging. 2016 May; 17(5):512-22. PMID: 26710817.
      Citations: 17     Fields:    Translation:Humans
    73. Li L, Deng YB, Liu K, Guo LD, Liu HY, Zhou W, Tang QY. Long-Term Effects of Pericardiectomy on Left Ventricular Mechanics Evaluated by Using Speckle Tracking Echocardiography in Patients with Constrictive Pericarditis. Ultrasound Med Biol. 2016 Feb; 42(2):421-9. PMID: 26653938.
      Citations: 1     Fields:    Translation:HumansCTClinical Trials
    74. Tang QY, Guo LD, Wang WX, Zhou W, Liu YN, Liu HY, Li L, Deng YB. Usefulness of contrast perfusion echocardiography for differential diagnosis of cardiac masses. Ultrasound Med Biol. 2015 Sep; 41(9):2382-90. PMID: 26087885.
      Citations: 8     Fields:    Translation:Humans
    75. Yao GH, Deng Y, Liu Y, Xu MJ, Zhang C, Deng YB, Ren WD, Li ZA, Tang H, Zhang QB, Mu YM, Fang LG, Zhang M, Yin LX, Zhang Y. Echocardiographic measurements in normal chinese adults focusing on cardiac chambers and great arteries: a prospective, nationwide, and multicenter study. J Am Soc Echocardiogr. 2015 May; 28(5):570-9. PMID: 25753502.
      Citations: 41     Fields:    Translation:Humans
    76. Yi HM, Zhang W, Ai X, Li KY, Deng YB. Radiofrequency ablation versus surgical resection for the treatment of hepatocellular carcinoma conforming to the Milan criteria: systemic review and meta-analysis. Int J Clin Exp Med. 2014; 7(10):3150-63. PMID: 25419346.
      Citations:    
    77. Sun J, Deng YB, Liu K, Wang YB. Effects of noradrenaline and adenosine triphosphate on the degree on contrast enhancement in a rabbit model of atherosclerosis during contrast-enhanced ultrasonography. Ultrasound Med Biol. 2014 Nov; 40(11):2655-61. PMID: 25218451.
      Citations: 3     Fields:    Translation:Animals
    78. Liu HY, Deng YB, Liu K, Li Y, Tang QY, Wei X, Chang S, Lu X. Left ventricular systolic strain of the cardiac allograft evaluated with three-dimensional speckle tracking echocardiography. J Huazhong Univ Sci Technolog Med Sci. 2013 Oct; 33(5):765-769. PMID: 24142734.
      Citations: 2     Fields:    Translation:Humans
    79. Sun J, Liu K, Tang QY, Zhang W, Deng YB. Correlation between enhanced intensity of atherosclerotic plaque at contrast-enhanced ultrasonography and density of histological neovascularization. J Huazhong Univ Sci Technolog Med Sci. 2013 Jun; 33(3):443-446. PMID: 23771675.
      Citations: 3     Fields:    Translation:Animals
    80. Zhu Y, Deng YB, Liu YN, Bi XJ, Sun J, Tang QY, Deng Q. Use of carotid plaque neovascularization at contrast-enhanced US to predict coronary events in patients with coronary artery disease. Radiology. 2013 Jul; 268(1):54-60. PMID: 23440321.
      Citations: 11     Fields:    Translation:Humans
    81. Wang C, Deng YB, Zhu Y, Liu YN, Bi XJ. Evaluation of subtle myocardial noncompaction by contrast echocardiography in patients with hypertrophic cardiomyopathy and its relationship with regional ventricular systolic dysfunction. J Ultrasound Med. 2012 Oct; 31(10):1551-7. PMID: 23011618.
      Citations: 7     Fields:    Translation:Humans
    82. Zhao S, Deng YB, Chen XL, Liu R. Assessment of right ventricular function in recipient twin of twin to twin transfusion syndrome with speckle tracking echocardiography. Ultrasound Med Biol. 2012 Sep; 38(9):1502-7. PMID: 22766115.
      Citations: 1     Fields:    Translation:Humans
    83. Zhu MH, Deng YB, Liu YN. Contrast echocardiographic characterization and follow-up of a cardiac paraganglioma. J Ultrasound Med. 2010 Jun; 29(6):1001-5. PMID: 20498476.
      Citations:    Fields:    Translation:Humans
    84. Deng YB, Liu R, Wu YH, Xiong L, Liu YN. Evaluation of short-axis and long-axis myocardial function with two-dimensional strain echocardiography in patients with different degrees of coronary artery stenosis. Ultrasound Med Biol. 2010 Feb; 36(2):227-33. PMID: 20045591.
      Citations: 7     Fields:    Translation:Humans
    85. Xiong L, Deng YB, Zhu Y, Liu YN, Bi XJ. Correlation of carotid plaque neovascularization detected by using contrast-enhanced US with clinical symptoms. Radiology. 2009 May; 251(2):583-9. PMID: 19304920.
      Citations: 48     Fields:    Translation:Humans
    86. Liu YN, Deng YB, Liu BB, Zhang QY. Rapid and accurate quantification of right ventricular volume and stroke volume by real-time 3-dimensional triplane echocardiography. Clin Cardiol. 2008 Aug; 31(8):378-82. PMID: 18727079.
      Citations: 1     Fields:    Translation:HumansAnimals
    87. Deng YB, Li CL, Chang Q. Chronic traumatic pseudoaneurysm of the ascending aorta causing right ventricular inflow obstruction. Circ J. 2003 Apr; 67(4):359-61. PMID: 12655170.
      Citations: 3     Fields:    Translation:Humans
    88. Deng YB, Chang Q, Xiang HJ, Li CL. Echocardiographic diagnosis and follow-up of left ventricular pseudoaneurysm complicating bacterial pericarditis. J Clin Ultrasound. 2003 Jan; 31(1):48-50. PMID: 12478653.
      Citations: 1     Fields:    Translation:Humans
    89. Deng YB, Li TL, Xiang HJ, Chang Q, Li CL. Impaired endothelial function in the brachial artery after Kawasaki disease and the effects of intravenous administration of vitamin C. Pediatr Infect Dis J. 2003 Jan; 22(1):34-9. PMID: 12544406.
      Citations: 15     Fields:    Translation:Humans
    90. Deng YB, Xiang HJ, Chang Q, Li CL. Evaluation by high-resolution ultrasonography of endothelial function in brachial artery after Kawasaki disease and the effects of intravenous administration of vitamin C. Circ J. 2002 Oct; 66(10):908-12. PMID: 12381083.
      Citations: 9     Fields:    Translation:HumansCTClinical Trials
    91. Deng YB, Yang HY, Li CL, Chang Q. Angiotensin receptor antagonist losartan improves endothelial function of epicardial coronary arteries in patients with essential hypertension. Clin Cardiol. 2002 Sep; 25(9):422-8. PMID: 12269521.
      Citations: 2     Fields:    Translation:Humans
    92. Deng YB, Wang DW, Li CL, Yang HY. Effects of the angiotensin receptor antagonist losartan on the response of the left main coronary artery to cold pressor test in patients with essential hypertension as assessed by echocardiography. Can J Cardiol. 2002 Apr; 18(4):389-96. PMID: 11992132.
      Citations: 1     Fields:    Translation:Humans
    93. Wang DW, Deng YB. Hypertrophic cardiomyopathy complicated by severe bradycardias: a pedigree report. Clin Cardiol. 2002 Feb; 25(2):76-80. PMID: 11841154.
      Citations: 4     Fields:    Translation:Humans
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