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Jianqiu (Michelle) Zhang

TitleProfessor
InstitutionUniversity of Texas at San Antonio
DepartmentElectrical and Computer Engineering
AddressOne UTSA Circle
Dept. of ECE
San Antonio TX 78249
Phone210-458-6856
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    Collapse Overview 
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    Signal processing for bioinformatics and biomedical applications, information theory and applications in genomics, and wireless communications.

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Ma L, Xie Y, Khoo RSH, Arman H, Wang B, Zhou W, Zhang J, Lin RB, Chen B. An Adaptive Hydrogen-Bonded Organic Framework for the Exclusive Recognition of p-Xylene. Chemistry. 2022 Feb 19; 28(11):e202104269. PMID: 34982835.
      Citations: 1     Fields:    
    2. Flores M, Liu Z, Zhang T, Hasib MM, Chiu YC, Ye Z, Paniagua K, Jo S, Zhang J, Gao SJ, Jin YF, Chen Y, Huang Y. Deep learning tackles single-cell analysis-a survey of deep learning for scRNA-seq analysis. Brief Bioinform. 2022 01 17; 23(1). PMID: 34929734.
      Citations: 9     Fields:    Translation:HumansCells
    3. Salekin S, Mostavi M, Chiu YC, Chen Y, Zhang JM, Huang Y. Predicting sites of epitranscriptome modifications using unsupervised representation learning based on generative adversarial networks. Front Phys. 2020 Jun; 8. PMID: 33274189.
      Citations:    
    4. Zhang X, Lin RB, Wang J, Wang B, Liang B, Yildirim T, Zhang J, Zhou W, Chen B. Optimization of the Pore Structures of MOFs for Record High Hydrogen Volumetric Working Capacity. Adv Mater. 2020 Apr; 32(17):e1907995. PMID: 32187764.
      Citations: 9     Fields:    
    5. Salekin S, Zhang JM, Huang Y. Base-pair resolution detection of transcription factor binding site by deep deconvolutional network. Bioinformatics. 2018 10 15; 34(20):3446-3453. PMID: 29757349.
      Citations: 7     Fields:    Translation:HumansCells
    6. Salekin S, Bari MG, Raphael I, Forsthuber TG, Zhang JM. Early response index: a statistic to discover potential early stage disease biomarkers. BMC Bioinformatics. 2017 Jun 23; 18(1):313. PMID: 28645323.
      Citations: 2     Fields:    Translation:Animals
    7. Bari MG, Salekin S, Zhang JM. A Robust and Efficient Feature Selection Algorithm for Microarray Data. Mol Inform. 2017 04; 36(4). PMID: 28000384.
      Citations: 3     Fields:    Translation:Humans
    8. Ma X, Zhu Y, Huang Y, Tegeler T, Gao SJ, Zhang J. Quantitative Proteomic Approach for MicroRNA Target Prediction Based on 18O/16O Labeling. Cancer Inform. 2015; 14(Suppl 5):163-173. PMID: 27980386.
      Citations:    
    9. Ghanat Bari M, Ramirez N, Wang Z, Zhang JM. MZDASoft: a software architecture that enables large-scale comparison of protein expression levels over multiple samples based on liquid chromatography/tandem mass spectrometry. Rapid Commun Mass Spectrom. 2015 Oct 15; 29(19):1841-8. PMID: 26331936.
      Citations: 1     Fields:    
    10. Ghanat Bari M, Ma X, Zhang J. PeakLink: a new peptide peak linking method in LC-MS/MS using wavelet and SVM. Bioinformatics. 2014 Sep 01; 30(17):2464-70. PMID: 24813213.
      Citations: 3     Fields:    Translation:Humans
    11. Cui J, Petritis K, Tegeler T, Petritis B, Ma X, Jin Y, Gao SJ, Zhang JM. Accurate LC peak boundary detection for ?6O/?8O labeled LC-MS data. PLoS One. 2013; 8(10):e72951. PMID: 24115998.
      Citations: 3     Fields:    
    12. Wang Y, Yang T, Ma Y, Halade GV, Zhang J, Lindsey ML, Jin YF. Mathematical modeling and stability analysis of macrophage activation in left ventricular remodeling post-myocardial infarction. BMC Genomics. 2012; 13 Suppl 6:S21. PMID: 23134700.
      Citations: 21     Fields:    Translation:AnimalsCells
    13. Cui J, Ma X, Chen L, Zhang J. SCFIA: a statistical corresponding feature identification algorithm for LC/MS. BMC Bioinformatics. 2011 Nov 11; 12:439. PMID: 22078262.
      Citations: 5     Fields:    
    14. Meng J, Zhang JM, Chen Y, Huang Y. Bayesian non-negative factor analysis for reconstructing transcription factor mediated regulatory networks. Proteome Sci. 2011 Oct 14; 9 Suppl 1:S9. PMID: 22166063.
      Citations:    
    15. Ma X, Cui J, Zhang J. Processing methods for signal suppression of FTMS data. Proteome Sci. 2011 Oct 14; 9 Suppl 1:S2. PMID: 22166077.
      Citations:    
    16. Haskins WE, Petritis K, Zhang J. MRCQuant- an accurate LC-MS relative isotopic quantification algorithm on TOF instruments. BMC Bioinformatics. 2011 Mar 15; 12:74. PMID: 21406110.
      Citations: 4     Fields:    
    17. Ma X, Hestilow TJ, Cui J, Zhang J. Suppression correction and characteristic study in liquid chromatography/Fourier transform mass spectrometry measurements. Rapid Commun Mass Spectrom. 2011 Feb 28; 25(4):551-7. PMID: 21259364.
      Citations: 2     Fields:    Translation:Humans
    18. Zhang J, Haskins W. ICPD-a new peak detection algorithm for LC/MS. BMC Genomics. 2010 Dec 01; 11 Suppl 3:S8. PMID: 21143790.
      Citations: 5     Fields:    
    19. Zhang J, Zhou X, Wang H, Suffredini A, Zhang L, Huang Y, Wong S. Bayesian Peptide Peak Detection for High Resolution TOF Mass Spectrometry. IEEE Trans Signal Process. 2010 Nov 01; 58(11):5883-5894. PMID: 21544266.
      Citations:    
    20. Sun Y, Zhang J, Braga-Neto U, Dougherty ER. BPDA - a Bayesian peptide detection algorithm for mass spectrometry. BMC Bioinformatics. 2010 Sep 29; 11:490. PMID: 20920238.
      Citations: 6     Fields:    
    21. Zhang J, Gonzalez E, Hestilow T, Haskins W, Huang Y. Review of peak detection algorithms in liquid-chromatography-mass spectrometry. Curr Genomics. 2009 Sep; 10(6):388-401. PMID: 20190954.
      Citations:    
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