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Jason Ladner

TitleAssistant Professor
Faculty RankAssistant Professor
InstitutionNorthern Arizona University
DepartmentPathogen & Microbiome Institute
AddressPO Box 4073
Flagstaff AZ 86011
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Obregon-Perko V, Mannino A, Ladner JT, Hodara V, Ebrahimi D, Parodi L, Callery J, Palacios G, Giavedoni LD. Adaptation of SIVmac to baboon primary cells results in complete absence of in vivo baboon infectivity. Front Cell Infect Microbiol. 2024; 14:1408245. PMID: 39006742.
      Citations:    Fields:    Translation:AnimalsCells
    2. Henson SN, Elko EA, Swiderski PM, Liang Y, Engelbrektson AL, Pi?a A, Boyle AS, Fink Z, Facista SJ, Martinez V, Rahee F, Brown A, Kelley EJ, Nelson GA, Raspet I, Mead HL, Altin JA, Ladner JT. Author Correction: PepSeq: a fully in vitro platform for highly multiplexed serology using customizable DNA-barcoded peptide libraries. Nat Protoc. 2024 May 16. PMID: 38755448.
      Citations:    Fields:    
    3. Elko EA, Mead HL, Nelson GA, Zaia JA, Ladner JT, Altin JA. Recurrent SARS-CoV-2 mutations at Spike D796 evade antibodies from pre-Omicron convalescent and vaccinated subjects. Microbiol Spectr. 2024 Feb 06; 12(2):e0329123. PMID: 38189279.
      Citations: 1     Fields:    Translation:HumansCells
    4. Janke NR, Williamson CHD, Drees KP, Su?rez-Esquivel M, Allen AR, Ladner JT, Quance CR, Robbe-Austerman S, O'Callaghan D, Whatmore AM, Foster JT. Global phylogenomic diversity of Brucella abortus: spread of a dominant lineage. Front Microbiol. 2023; 14:1287046. PMID: 38094632.
      Citations:    
    5. Ladner JT, Sahl JW. Towards a post-pandemic future for global pathogen genome sequencing. PLoS Biol. 2023 08; 21(8):e3002225. PMID: 37527248.
      Citations:    Fields:    Translation:HumansCellsPHPublic Health
    6. Kelley EJ, Henson SN, Rahee F, Boyle AS, Engelbrektson AL, Nelson GA, Mead HL, Anderson NL, Razavi M, Yip R, Ladner JT, Scriba TJ, Altin JA. Virome-wide detection of natural infection events and the associated antibody dynamics using longitudinal highly-multiplexed serology. Nat Commun. 2023 03 30; 14(1):1783. PMID: 36997517.
      Citations: 3     Fields:    Translation:HumansCellsPHPublic Health
    7. Henson SN, Elko EA, Swiderski PM, Liang Y, Engelbrektson AL, Pi?a A, Boyle AS, Fink Z, Facista SJ, Martinez V, Rahee F, Brown A, Kelley EJ, Nelson GA, Raspet I, Mead HL, Altin JA, Ladner JT. PepSeq: a fully in vitro platform for highly multiplexed serology using customizable DNA-barcoded peptide libraries. Nat Protoc. 2023 02; 18(2):396-423. PMID: 36385198.
      Citations: 6     Fields:    Translation:Cells
    8. Schuettenberg A, Pi?a A, Metrailer M, Pel?ez-S?nchez RG, Agudelo-Fl?rez P, Lopez J?, Ryle L, Monroy FP, Altin JA, Ladner JT. Highly Multiplexed Serology for Nonhuman Mammals. Microbiol Spectr. 2022 10 26; 10(5):e0287322. PMID: 36125316.
      Citations:    Fields:    Translation:Animals
    9. Ladner JT, Palmer JM, Ettinger CL, Stajich JE, Farrell TM, Glorioso BM, Lawson B, Price SJ, Stengle AG, Grear DA, Lorch JM. The population genetics of the causative agent of snake fungal disease indicate recent introductions to the USA. PLoS Biol. 2022 06; 20(6):e3001676. PMID: 35737674.
      Citations: 14     Fields:    Translation:Animals
    10. Elko EA, Nelson GA, Mead HL, Kelley EJ, Carvalho ST, Sarbo NG, Harms CE, Le Verche V, Cardoso AA, Ely JL, Boyle AS, Pi?a A, Henson SN, Rahee F, Keim PS, Celona KR, Yi J, Settles EW, Bota DA, Yu GC, Morris SR, Zaia JA, Ladner JT, Altin JA. COVID-19 vaccination elicits an evolving, cross-reactive antibody response to epitopes conserved with endemic coronavirus spike proteins. Cell Rep. 2022 07 05; 40(1):111022. PMID: 35753310.
      Citations: 6     Fields:    Translation:HumansCellsPHPublic Health
    11. Elko EA, Nelson GA, Mead HL, Kelley EJ, Le Verche V, Cardoso AA, Ely JL, Boyle AS, Pi?a A, Henson SN, Rahee F, Keim PS, Celona KR, Yi J, Settles EW, Yu GC, Morris SR, Zaia JA, Ladner JT, Altin JA. COVID-19 vaccination recruits and matures cross-reactive antibodies to conserved epitopes in endemic coronavirus Spike proteins. medRxiv. 2022 Jan 25. PMID: 35118479.
      Citations:    
    12. De Luca E, ?lvarez-Narv?ez S, Maboni G, Baptista RP, Nemeth NM, Niedringhaus KD, Ladner JT, Lorch JM, Koroleva G, Lovett S, Palacios GF, Sanchez S. Comparative Genomics Analyses Support the Reclassification of Bisgaard Taxon 40 as Mergibacter gen. nov., With Mergibacter septicus sp. nov. as Type Species: Novel Insights Into the Phylogeny and Virulence Factors of a Pasteurellaceae Family Member Associated With Mortality Events in Seabirds. Front Microbiol. 2021; 12:667356. PMID: 34880834.
      Citations:    
    13. Ladner JT. Genomic signatures for predicting the zoonotic potential of novel viruses. PLoS Biol. 2021 09; 19(9):e3001403. PMID: 34587150.
      Citations: 5     Fields:    Translation:Cells
    14. Smith LM, Ladner JT, Hodara VL, Parodi LM, Harris RA, Callery JE, Lai Z, Zou Y, Raveedran M, Rogers J, Giavedoni LD. Multiplexed Simian Immunodeficiency Virus-Specific Paired RNA-Guided Cas9 Nickases Inactivate Proviral DNA. J Virol. 2021 Nov 09; 95(23):e0088221. PMID: 34549979.
      Citations: 1     Fields:    Translation:HumansAnimalsCells
    15. Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Comarova Z, Lu A, Porozov Y, Wu A, Abedalthagafi MS, Nagaraj SH, Smith AL, Skums P, Ladner J, Lam TT, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. Unlocking capacities of viral genomics for the COVID-19 pandemic response. ArXiv. 2021 Apr 28. PMID: 33948451.
      Citations:    
    16. Ladner JT, Henson SN, Boyle AS, Engelbrektson AL, Fink ZW, Rahee F, D'ambrozio J, Schaecher KE, Stone M, Dong W, Dadwal S, Yu J, Caligiuri MA, Cieplak P, Bj?r?s M, Fenstad MH, Nordb? SA, Kainov DE, Muranaka N, Chee MS, Shiryaev SA, Altin JA. Epitope-resolved profiling of the SARS-CoV-2 antibody response identifies cross-reactivity with endemic human coronaviruses. Cell Rep Med. 2021 01 19; 2(1):100189. PMID: 33495758.
      Citations: 103     Fields:    
    17. Biot FV, Bachert BA, Mlynek KD, Toothman RG, Koroleva GI, Lovett SP, Klimko CP, Palacios GF, Cote CK, Ladner JT, Bozue JA. Evolution of Antibiotic Resistance in Surrogates of Francisella tularensis (LVS and Francisella novicida): Effects on Biofilm Formation and Fitness. Front Microbiol. 2020; 11:593542. PMID: 33193267.
      Citations:    
    18. Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. mBio. 2020 09 04; 11(5). PMID: 32887735.
      Citations: 20     Fields:    Translation:HumansCellsPHPublic Health
    19. Whitmer SLM, Lo MK, Sazzad HMS, Zufan S, Gurley ES, Sultana S, Amman B, Ladner JT, Rahman MZ, Doan S, Satter SM, Flora MS, Montgomery JM, Nichol ST, Spiropoulou CF, Klena JD. Inference of Nipah virus evolution, 1999-2015. Virus Evol. 2021 Jan; 7(1):veaa062. PMID: 34422315.
      Citations:    
    20. Ladner JT, Henson SN, Boyle AS, Engelbrektson AL, Fink ZW, Rahee F, D'ambrozio J, Schaecher KE, Stone M, Dong W, Dadwal S, Yu J, Caligiuri MA, Cieplak P, Bj?r?s M, Fenstad MH, Nordb? SA, Kainov DE, Muranaka N, Chee MS, Shiryaev SA, Altin JA. Epitope-resolved profiling of the SARS-CoV-2 antibody response identifies cross-reactivity with an endemic human CoV. bioRxiv. 2020 Jul 27. PMID: 32743570.
      Citations:    
    21. Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, Worobey M, Keim P, Caporaso JG. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000Res. 2020; 9:657. PMID: 33500774.
      Citations: 13     Fields:    Translation:HumansCellsPHPublic Health
    22. Su?rez-Esquivel M, Hern?ndez-Mora G, Ruiz-Villalobos N, Barquero-Calvo E, Chac?n-D?az C, Ladner JT, Oviedo-S?nchez G, Foster JT, Rojas-Campos N, Chaves-Olarte E, Thomson NR, Moreno E, Guzm?n-Verri C. Persistence of Brucella abortus lineages revealed by genomic characterization and phylodynamic analysis. PLoS Negl Trop Dis. 2020 04; 14(4):e0008235. PMID: 32287327.
      Citations: 9     Fields:    Translation:HumansAnimalsCells
    23. Wiley MR, Fakoli L, Letizia AG, Welch SR, Ladner JT, Prieto K, Reyes D, Espy N, Chitty JA, Pratt CB, Di Paola N, Taweh F, Williams D, Saindon J, Davis WG, Patel K, Holland M, Negr?n D, Str?her U, Nichol ST, Sozhamannan S, Rollin PE, Dogba J, Nyenswah T, Bolay F, Albari?o CG, Fallah M, Palacios G. Lassa virus circulating in Liberia: a retrospective genomic characterisation. Lancet Infect Dis. 2019 12; 19(12):1371-1378. PMID: 31588039.
      Citations: 24     Fields:    Translation:HumansCellsPHPublic Health
    24. Grubaugh ND, Saraf S, Gangavarapu K, Watts A, Tan AL, Oidtman RJ, Ladner JT, Oliveira G, Matteson NL, Kraemer MUG, Vogels CBF, Hentoff A, Bhatia D, Stanek D, Scott B, Landis V, Stryker I, Cone MR, Kopp EW, Cannons AC, Heberlein-Larson L, White S, Gillis LD, Ricciardi MJ, Kwal J, Lichtenberger PK, Magnani DM, Watkins DI, Palacios G, Hamer DH, Gardner LM, Perkins TA, Baele G, Khan K, Morrison A, Isern S, Michael SF, Andersen KG. Travel Surveillance and Genomics Uncover a Hidden Zika Outbreak during the Waning Epidemic. Cell. 2019 08 22; 178(5):1057-1071.e11. PMID: 31442400.
      Citations: 38     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    25. Work TM, Dagenais J, Stacy BA, Ladner JT, Lorch JM, Balazs GH, Barquero-Calvo E, Berlowski-Zier BM, Breeden R, Corrales-G?mez N, Gonzalez-Barrientos R, Harris HS, Hern?ndez-Mora G, Herrera-Ulloa ?, Hesami S, Jones TT, Morales JA, Norton TM, Rameyer RA, Taylor DR, Waltzek TB. A novel host-adapted strain of Salmonella Typhimurium causes renal disease in olive ridley turtles (Lepidochelys olivacea) in the Pacific. Sci Rep. 2019 06 27; 9(1):9313. PMID: 31249336.
      Citations: 7     Fields:    Translation:AnimalsCells
    26. Mbala-Kingebeni P, Aziza A, Di Paola N, Wiley MR, Makiala-Mandanda S, Caviness K, Pratt CB, Ladner JT, Kugelman JR, Prieto K, Chitty JA, Larson PA, Beitzel B, Ayouba A, Vidal N, Karhemere S, Diop M, Diagne MM, Faye M, Faye O, Aruna A, Nsio J, Mulangu F, Mukadi D, Mukadi P, Kombe J, Mulumba A, Villabona-Arenas CJ, Pukuta E, Gonzalez J, Bartlett ML, Sozhamannan S, Gross SM, Schroth GP, Tim R, Zhao JJ, Kuhn JH, Diallo B, Yao M, Fall IS, Ndjoloko B, Mossoko M, Lacroix A, Delaporte E, Sanchez-Lockhart M, Sall AA, Muyembe-Tamfum JJ, Peeters M, Palacios G, Ahuka-Mundeke S. Medical countermeasures during the 2018 Ebola virus disease outbreak in the North Kivu and Ituri Provinces of the Democratic Republic of the Congo: a rapid genomic assessment. Lancet Infect Dis. 2019 06; 19(6):648-657. PMID: 31000464.
      Citations: 37     Fields:    Translation:HumansCellsPHPublic Health
    27. Ladner JT, Grubaugh ND, Pybus OG, Andersen KG. Precision epidemiology for infectious disease control. Nat Med. 2019 02; 25(2):206-211. PMID: 30728537.
      Citations: 43     Fields:    Translation:HumansPHPublic Health
    28. Jansen van Vuren P, Ladner JT, Grobbelaar AA, Wiley MR, Lovett S, Allam M, Ismail A, le Roux C, Weyer J, Moolla N, Storm N, Kgaladi J, Sanchez-Lockhart M, Conteh O, Palacios G, Paweska JT. Phylodynamic Analysis of Ebola Virus Disease Transmission in Sierra Leone. Viruses. 2019 01 16; 11(1). PMID: 30654482.
      Citations:    Fields:    Translation:HumansCellsPHPublic Health
    29. Grubaugh ND, Ladner JT, Lemey P, Pybus OG, Rambaut A, Holmes EC, Andersen KG. Tracking virus outbreaks in the twenty-first century. Nat Microbiol. 2019 01; 4(1):10-19. PMID: 30546099.
      Citations: 167     Fields:    Translation:HumansCellsPHPublic Health
    30. Oliveira DBL, Durigon GS, Mendes ?A, Ladner JT, Andreata-Santos R, Araujo DB, Botosso VF, Paola ND, Neto DFL, Cunha MP, Braconi CT, Alves RPS, Jesus MR, Pereira LR, Melo SR, Mesquita FS, Silveira VB, Thomazelli LM, Favoretto SR, Almonfrey FB, Abdulkader RCRM, Gabrili JM, Tambourgi DV, Oliveira SF, Prieto K, Wiley MR, Ferreira LCS, Silva MV, Palacios GF, Zanotto PMA, Durigon EL. Persistence and Intra-Host Genetic Evolution of Zika Virus Infection in Symptomatic Adults: A Special View in the Male Reproductive System. Viruses. 2018 11 07; 10(11). PMID: 30405055.
      Citations: 16     Fields:    Translation:HumansCells
    31. Mate SE, Wiley MR, Ladner JT, Dokubo EK, Fakoli L, Fallah M, Nyenswah TG, DiClaro JW, Deboer JT, Williams DE, Bolay F, Palacios G. Cross-Border Transmission of Ebola Virus as the Cause of a Resurgent Outbreak in Liberia in April 2016. Clin Infect Dis. 2018 09 14; 67(7):1147-1149. PMID: 29659740.
      Citations: 2     Fields:    Translation:HumansCellsPHPublic Health
    32. Dokubo EK, Wendland A, Mate SE, Ladner JT, Hamblion EL, Raftery P, Blackley DJ, Laney AS, Mahmoud N, Wayne-Davies G, Hensley L, Stavale E, Fakoli L, Gregory C, Chen TH, Koryon A, Roth Allen D, Mann J, Hickey A, Saindon J, Badini M, Baller A, Clement P, Bolay F, Wapoe Y, Wiley MR, Logue J, Dighero-Kemp B, Higgs E, Gasasira A, Williams DE, Dahn B, Kateh F, Nyenswah T, Palacios G, Fallah MP. Persistence of Ebola virus after the end of widespread transmission in Liberia: an outbreak report. Lancet Infect Dis. 2018 09; 18(9):1015-1024. PMID: 30049622.
      Citations: 20     Fields:    Translation:HumansPHPublic Health
    33. Whitmer SLM, Ladner JT, Wiley MR, Patel K, Dudas G, Rambaut A, Sahr F, Prieto K, Shepard SS, Carmody E, Knust B, Naidoo D, Deen G, Formenty P, Nichol ST, Palacios G, Str?her U. Active Ebola Virus Replication and Heterogeneous Evolutionary Rates in EVD Survivors. Cell Rep. 2018 01 30; 22(5):1159-1168. PMID: 29386105.
      Citations: 20     Fields:    Translation:HumansCells
    34. Johnson SL, Daligault HE, Davenport KW, Jaissle J, Frey KG, Ladner JT, Broomall SM, Bishop-Lilly KA, Bruce DC, Gibbons HS, Coyne SR, Lo CC, Meincke L, Munk AC, Koroleva GI, Rosenzweig CN, Palacios GF, Redden CL, Minogue TD, Chain PS. Correction for Johnson et al., "Complete Genome Sequences for 35 Biothreat Assay-Relevant Bacillus Species". Genome Announc. 2018 01 18; 6(3). PMID: 29348328.
      Citations:    
    35. Lowen RG, Bocan TM, Kane CD, Cazares LH, Kota KP, Ladner JT, Nasar F, Pitt L, Smith DR, Soloveva V, Sun MG, Zeng X, Bavari S. Countering Zika Virus: The USAMRIID Response. Adv Exp Med Biol. 2018; 1062:303-318. PMID: 29845541.
      Citations: 2     Fields:    Translation:HumansAnimalsCells
    36. Ruedas JB, Ladner JT, Ettinger CR, Gummuluru S, Palacios G, Connor JH. Spontaneous Mutation at Amino Acid 544 of the Ebola Virus Glycoprotein Potentiates Virus Entry and Selection in Tissue Culture. J Virol. 2017 08 01; 91(15). PMID: 28539437.
      Citations: 17     Fields:    Translation:HumansAnimalsCells
    37. Golden JW, Beitzel B, Ladner JT, Mucker EM, Kwilas SA, Palacios G, Hooper JW. An attenuated Machupo virus with a disrupted L-segment intergenic region protects guinea pigs against lethal Guanarito virus infection. Sci Rep. 2017 07 05; 7(1):4679. PMID: 28680057.
      Citations: 14     Fields:    Translation:HumansAnimalsCells
    38. Costa-da-Silva AL, Ioshino RS, Petersen V, Lima AF, Cunha MDP, Wiley MR, Ladner JT, Prieto K, Palacios G, Costa DD, Suesdek L, Zanotto PMA, Capurro ML. First report of naturally infected Aedes aegypti with chikungunya virus genotype ECSA in the Americas. PLoS Negl Trop Dis. 2017 Jun; 11(6):e0005630. PMID: 28614394.
      Citations: 35     Fields:    Translation:AnimalsCellsPHPublic Health
    39. Grubaugh ND, Ladner JT, Kraemer MUG, Dudas G, Tan AL, Gangavarapu K, Wiley MR, White S, Th?z? J, Magnani DM, Prieto K, Reyes D, Bingham AM, Paul LM, Robles-Sikisaka R, Oliveira G, Pronty D, Barcellona CM, Metsky HC, Baniecki ML, Barnes KG, Chak B, Freije CA, Gladden-Young A, Gnirke A, Luo C, MacInnis B, Matranga CB, Park DJ, Qu J, Schaffner SF, Tomkins-Tinch C, West KL, Winnicki SM, Wohl S, Yozwiak NL, Quick J, Fauver JR, Khan K, Brent SE, Reiner RC, Lichtenberger PN, Ricciardi MJ, Bailey VK, Watkins DI, Cone MR, Kopp EW, Hogan KN, Cannons AC, Jean R, Monaghan AJ, Garry RF, Loman NJ, Faria NR, Porcelli MC, Vasquez C, Nagle ER, Cummings DAT, Stanek D, Rambaut A, Sanchez-Lockhart M, Sabeti PC, Gillis LD, Michael SF, Bedford T, Pybus OG, Isern S, Palacios G, Andersen KG. Genomic epidemiology reveals multiple introductions of Zika virus into the United States. Nature. 2017 06 15; 546(7658):401-405. PMID: 28538723.
      Citations: 159     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    40. Villa EC, Maruyama SR, de Miranda-Santos IKF, Palacios G, Ladner JT. Complete Coding Genome Sequence for Mogiana Tick Virus, a Jingmenvirus Isolated from Ticks in Brazil. Genome Announc. 2017 May 04; 5(18). PMID: 28473376.
      Citations:    
    41. Dudas G, Carvalho LM, Bedford T, Tatem AJ, Baele G, Faria NR, Park DJ, Ladner JT, Arias A, Asogun D, Bielejec F, Caddy SL, Cotten M, D'Ambrozio J, Dellicour S, Di Caro A, Diclaro JW, Duraffour S, Elmore MJ, Fakoli LS, Faye O, Gilbert ML, Gevao SM, Gire S, Gladden-Young A, Gnirke A, Goba A, Grant DS, Haagmans BL, Hiscox JA, Jah U, Kugelman JR, Liu D, Lu J, Malboeuf CM, Mate S, Matthews DA, Matranga CB, Meredith LW, Qu J, Quick J, Pas SD, Phan MVT, Pollakis G, Reusken CB, Sanchez-Lockhart M, Schaffner SF, Schieffelin JS, Sealfon RS, Simon-Loriere E, Smits SL, Stoecker K, Thorne L, Tobin EA, Vandi MA, Watson SJ, West K, Whitmer S, Wiley MR, Winnicki SM, Wohl S, W?lfel R, Yozwiak NL, Andersen KG, Blyden SO, Bolay F, Carroll MW, Dahn B, Diallo B, Formenty P, Fraser C, Gao GF, Garry RF, Goodfellow I, G?nther S, Happi CT, Holmes EC, Kargbo B, Ke?ta S, Kellam P, Koopmans MPG, Kuhn JH, Loman NJ, Magassouba N, Naidoo D, Nichol ST, Nyenswah T, Palacios G, Pybus OG, Sabeti PC, Sall A, Str?her U, Wurie I, Suchard MA, Lemey P, Rambaut A. Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nature. 2017 04 20; 544(7650):309-315. PMID: 28405027.
      Citations: 191     Fields:    Translation:HumansCellsPHPublic Health
    42. Chance T, Chua J, Toothman RG, Ladner JT, Nuss JE, Raymond JL, Biot FV, Demons S, Miller L, Halasohoris S, Mou S, Koroleva G, Lovett S, Palacios G, Vietri NJ, Worsham PL, Cote CK, Kijek TM, Bozue JA. A spontaneous mutation in kdsD, a biosynthesis gene for 3 Deoxy-D-manno-Octulosonic Acid, occurred in a ciprofloxacin resistant strain of Francisella tularensis and caused a high level of attenuation in murine models of tularemia. PLoS One. 2017; 12(3):e0174106. PMID: 28328947.
      Citations: 8     Fields:    Translation:AnimalsCells
    43. Tuanyok A, Mayo M, Scholz H, Hall CM, Allender CJ, Kaestli M, Ginther J, Spring-Pearson S, Bollig MC, Stone JK, Settles EW, Busch JD, Sidak-Loftis L, Sahl JW, Thomas A, Kreutzer L, Georgi E, Gee JE, Bowen RA, Ladner JT, Lovett S, Koroleva G, Palacios G, Wagner DM, Currie BJ, Keim P. Burkholderia humptydooensis sp. nov., a New Species Related to Burkholderia thailandensis and the Fifth Member of the Burkholderia pseudomallei Complex. Appl Environ Microbiol. 2017 03 01; 83(5). PMID: 27986727.
      Citations: 17     Fields:    Translation:AnimalsCellsPHPublic Health
    44. Lovett S, Chase K, Koroleva G, Palacios G, Rozak D, Ladner JT. Complete Genome Sequence of Pigmentation-Negative Yersinia pestis Strain Cadman. Genome Announc. 2016 Oct 27; 4(5). PMID: 27789646.
      Citations:    
    45. Sahl JW, Vazquez AJ, Hall CM, Busch JD, Tuanyok A, Mayo M, Schupp JM, Lummis M, Pearson T, Shippy K, Colman RE, Allender CJ, Theobald V, Sarovich DS, Price EP, Hutcheson A, Korlach J, LiPuma JJ, Ladner J, Lovett S, Koroleva G, Palacios G, Limmathurotsakul D, Wuthiekanun V, Wongsuwan G, Currie BJ, Keim P, Wagner DM. The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers. mBio. 2016 09 20; 7(5). PMID: 27651357.
      Citations: 31     Fields:    Translation:HumansCells
    46. Ladner JT, Wiley MR, Beitzel B, Auguste AJ, Dupuis AP, Lindquist ME, Sibley SD, Kota KP, Fetterer D, Eastwood G, Kimmel D, Prieto K, Guzman H, Aliota MT, Reyes D, Brueggemann EE, St John L, Hyeroba D, Lauck M, Friedrich TC, O'Connor DH, Gestole MC, Cazares LH, Popov VL, Castro-Llanos F, Kochel TJ, Kenny T, White B, Ward MD, Loaiza JR, Goldberg TL, Weaver SC, Kramer LD, Tesh RB, Palacios G. A Multicomponent Animal Virus Isolated from Mosquitoes. Cell Host Microbe. 2016 Sep 14; 20(3):357-367. PMID: 27569558.
      Citations: 81     Fields:    Translation:AnimalsCells
    47. Folarin OA, Ehichioya D, Schaffner SF, Winnicki SM, Wohl S, Eromon P, West KL, Gladden-Young A, Oyejide NE, Matranga CB, Deme AB, James A, Tomkins-Tinch C, Onyewurunwa K, Ladner JT, Palacios G, Nosamiefan I, Andersen KG, Omilabu S, Park DJ, Yozwiak NL, Nasidi A, Garry RF, Tomori O, Sabeti PC, Happi CT. Ebola Virus Epidemiology and Evolution in Nigeria. J Infect Dis. 2016 10 15; 214(suppl 3):S102-S109. PMID: 27377746.
      Citations: 12     Fields:    Translation:HumansCellsPHPublic Health
    48. Kuhn JH, Wiley MR, Rodriguez SE, B?o Y, Prieto K, Travassos da Rosa AP, Guzman H, Savji N, Ladner JT, Tesh RB, Wada J, Jahrling PB, Bente DA, Palacios G. Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae). Viruses. 2016 06 10; 8(6). PMID: 27294949.
      Citations: 27     Fields:    Translation:AnimalsCells
    49. Ladner JT, Wiley MR, Prieto K, Yasuda CY, Nagle E, Kasper MR, Reyes D, Vasilakis N, Heang V, Weaver SC, Haddow A, Tesh RB, Sovann L, Palacios G. Complete Genome Sequences of Five Zika Virus Isolates. Genome Announc. 2016 May 12; 4(3). PMID: 27174284.
      Citations:    
    50. Blackley DJ, Wiley MR, Ladner JT, Fallah M, Lo T, Gilbert ML, Gregory C, D'ambrozio J, Coulter S, Mate S, Balogun Z, Kugelman J, Nwachukwu W, Prieto K, Yeiah A, Amegashie F, Kearney B, Wisniewski M, Saindon J, Schroth G, Fakoli L, Diclaro JW, Kuhn JH, Hensley LE, Jahrling PB, Str?her U, Nichol ST, Massaquoi M, Kateh F, Clement P, Gasasira A, Bolay F, Monroe SS, Rambaut A, Sanchez-Lockhart M, Scott Laney A, Nyenswah T, Christie A, Palacios G. Reduced evolutionary rate in reemerged Ebola virus transmission chains. Sci Adv. 2016 Apr; 2(4):e1600378. PMID: 27386513.
      Citations: 42     Fields:    Translation:HumansCellsPHPublic Health
    51. Johnson SL, Bishop-Lilly KA, Ladner JT, Daligault HE, Davenport KW, Jaissle J, Frey KG, Koroleva GI, Bruce DC, Coyne SR, Broomall SM, Ketheesan N, Mayo M, Hoffmaster A, Elrod MG, Wuthiekanun V, Tuanyok A, Norton R, Currie BJ, Wagner DM, Keim P, Li PE, Teshima H, Gibbons HS, Palacios GF, Rosenzweig CN, Redden CL, Xu Y, Minogue TD, Chain PS. Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor. Genome Announc. 2016 Apr 21; 4(2). PMID: 27103731.
      Citations:    
    52. Kugelman JR, Rossi CA, Wiley MR, Ladner JT, Nagle ER, Pfeffer BP, Garcia K, Prieto K, Wada J, Kuhn JH, Palacios G. Informing the Historical Record of Experimental Nonhuman Primate Infections with Ebola Virus: Genomic Characterization of USAMRIID Ebola Virus/H.sapiens-tc/COD/1995/Kikwit-9510621 Challenge Stock "R4368" and Its Replacement "R4415". PLoS One. 2016; 11(3):e0150919. PMID: 27002733.
      Citations: 11     Fields:    Translation:AnimalsCells
    53. Kilianski A, Carcel P, Yao S, Roth P, Schulte J, Donarum GB, Fochler ET, Hill JM, Liem AT, Wiley MR, Ladner JT, Pfeffer BP, Elliot O, Petrosov A, Jima DD, Vallard TG, Melendrez MC, Skowronski E, Quan PL, Lipkin WI, Gibbons HS, Hirschberg DL, Palacios GF, Rosenzweig CN. Pathosphere.org: pathogen detection and characterization through a web-based, open?source informatics platform. BMC Bioinformatics. 2015 Dec 29; 16:416. PMID: 26714571.
      Citations: 9     Fields:    Translation:HumansAnimalsCells
    54. Trefry JC, Wollen SE, Nasar F, Shamblin JD, Kern SJ, Bearss JJ, Jefferson MA, Chance TB, Kugelman JR, Ladner JT, Honko AN, Kobs DJ, Wending MQ, Sabourin CL, Pratt WD, Palacios GF, Pitt ML. Ebola Virus Infections in Nonhuman Primates Are Temporally Influenced by Glycoprotein Poly-U Editing Site Populations in the Exposure Material. Viruses. 2015 Dec 19; 7(12):6739-54. PMID: 26703716.
      Citations: 17     Fields:    Translation:Animals
    55. Ladner JT, Wiley MR, Mate S, Dudas G, Prieto K, Lovett S, Nagle ER, Beitzel B, Gilbert ML, Fakoli L, Diclaro JW, Schoepp RJ, Fair J, Kuhn JH, Hensley LE, Park DJ, Sabeti PC, Rambaut A, Sanchez-Lockhart M, Bolay FK, Kugelman JR, Palacios G. Evolution and Spread of Ebola Virus in Liberia, 2014-2015. Cell Host Microbe. 2015 Dec 09; 18(6):659-69. PMID: 26651942.
      Citations: 60     Fields:    Translation:HumansCells
    56. Chiang CY, Ulrich RL, Ulrich MP, Eaton B, Ojeda JF, Lane DJ, Kota KP, Kenny TA, Ladner JT, Dickson SP, Kuehl K, Raychaudhuri R, Sun M, Bavari S, Wolcott MJ, Covell D, Panchal RG. Characterization of the murine macrophage response to infection with virulent and avirulent Burkholderia species. BMC Microbiol. 2015 Nov 06; 15:259. PMID: 26545875.
      Citations: 11     Fields:    Translation:AnimalsCells
    57. Mate SE, Kugelman JR, Nyenswah TG, Ladner JT, Wiley MR, Cordier-Lassalle T, Christie A, Schroth GP, Gross SM, Davies-Wayne GJ, Shinde SA, Murugan R, Sieh SB, Badio M, Fakoli L, Taweh F, de Wit E, van Doremalen N, Munster VJ, Pettitt J, Prieto K, Humrighouse BW, Str?her U, DiClaro JW, Hensley LE, Schoepp RJ, Safronetz D, Fair J, Kuhn JH, Blackley DJ, Laney AS, Williams DE, Lo T, Gasasira A, Nichol ST, Formenty P, Kateh FN, De Cock KM, Bolay F, Sanchez-Lockhart M, Palacios G. Molecular Evidence of Sexual Transmission of Ebola Virus. N Engl J Med. 2015 Dec 17; 373(25):2448-54. PMID: 26465384.
      Citations: 197     Fields:    Translation:HumansCells
    58. Whitehouse CA, Chase K, Embers ME, Kulesh DA, Ladner JT, Palacios GF, Minogue TD. Development of real-time PCR assays for the detection of Moraxella macacae associated with bloody nose syndrome in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques. J Med Primatol. 2015 Dec; 44(6):364-72. PMID: 26365904.
      Citations: 3     Fields:    Translation:AnimalsCells
    59. Kugelman JR, Kugelman-Tonos J, Ladner JT, Pettit J, Keeton CM, Nagle ER, Garcia KY, Froude JW, Kuehne AI, Kuhn JH, Bavari S, Zeitlin L, Dye JM, Olinger GG, Sanchez-Lockhart M, Palacios GF. Emergence of Ebola Virus Escape Variants in Infected Nonhuman Primates Treated with the MB-003 Antibody Cocktail. Cell Rep. 2015 Sep 29; 12(12):2111-20. PMID: 26365189.
      Citations: 43     Fields:    Translation:HumansAnimalsCells
    60. Kugelman JR, Wiley MR, Mate S, Ladner JT, Beitzel B, Fakoli L, Taweh F, Prieto K, Diclaro JW, Minogue T, Schoepp RJ, Schaecher KE, Pettitt J, Bateman S, Fair J, Kuhn JH, Hensley L, Park DJ, Sabeti PC, Sanchez-Lockhart M, Bolay FK, Palacios G. Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia. Emerg Infect Dis. 2015 Jul; 21(7):1135-43. PMID: 26079255.
      Citations: 47     Fields:    Translation:HumansCells
    61. Park DJ, Dudas G, Wohl S, Goba A, Whitmer SL, Andersen KG, Sealfon RS, Ladner JT, Kugelman JR, Matranga CB, Winnicki SM, Qu J, Gire SK, Gladden-Young A, Jalloh S, Nosamiefan D, Yozwiak NL, Moses LM, Jiang PP, Lin AE, Schaffner SF, Bird B, Towner J, Mamoh M, Gbakie M, Kanneh L, Kargbo D, Massally JL, Kamara FK, Konuwa E, Sellu J, Jalloh AA, Mustapha I, Foday M, Yillah M, Erickson BR, Sealy T, Blau D, Paddock C, Brault A, Amman B, Basile J, Bearden S, Belser J, Bergeron E, Campbell S, Chakrabarti A, Dodd K, Flint M, Gibbons A, Goodman C, Klena J, McMullan L, Morgan L, Russell B, Salzer J, Sanchez A, Wang D, Jungreis I, Tomkins-Tinch C, Kislyuk A, Lin MF, Chapman S, MacInnis B, Matthews A, Bochicchio J, Hensley LE, Kuhn JH, Nusbaum C, Schieffelin JS, Birren BW, Forget M, Nichol ST, Palacios GF, Ndiaye D, Happi C, Gevao SM, Vandi MA, Kargbo B, Holmes EC, Bedford T, Gnirke A, Str?her U, Rambaut A, Garry RF, Sabeti PC. Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone. Cell. 2015 Jun 18; 161(7):1516-26. PMID: 26091036.
      Citations: 157     Fields:    Translation:HumansCellsPHPublic Health
    62. Christie A, Davies-Wayne GJ, Cordier-Lassalle T, Cordier-Lasalle T, Blackley DJ, Laney AS, Williams DE, Shinde SA, Badio M, Lo T, Mate SE, Ladner JT, Wiley MR, Kugelman JR, Palacios G, Holbrook MR, Janosko KB, de Wit E, van Doremalen N, Munster VJ, Pettitt J, Schoepp RJ, Verhenne L, Evlampidou I, Kollie KK, Sieh SB, Gasasira A, Bolay F, Kateh FN, Nyenswah TG, De Cock KM. Possible sexual transmission of Ebola virus - Liberia, 2015. MMWR Morb Mortal Wkly Rep. 2015 May 08; 64(17):479-81. PMID: 25950255.
      Citations: 92     Fields:    Translation:HumansCellsPHPublic Health
    63. Palacios G, Wiley MR, Travassos da Rosa APA, Guzman H, Quiroz E, Savji N, Carrera JP, Bussetti AV, Ladner JT, Ian Lipkin W, Tesh RB. Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae). J Gen Virol. 2015 Aug; 96(8):2079-2085. PMID: 25934793.
      Citations: 13     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    64. Johnson SL, Daligault HE, Davenport KW, Coyne SR, Frey KG, Koroleva GI, Broomall SM, Bishop-Lilly KA, Bruce DC, Chertkov O, Freitas T, Jaissle J, Ladner JT, Rosenzweig CN, Gibbons HS, Palacios GF, Redden CL, Xu Y, Minogue TD, Chain PS. Genome sequencing of 18 francisella strains to aid in assay development and testing. Genome Announc. 2015 Apr 30; 3(2). PMID: 25931589.
      Citations:    
    65. Johnson SL, Daligault HE, Davenport KW, Jaissle J, Frey KG, Ladner JT, Broomall SM, Bishop-Lilly KA, Bruce DC, Coyne SR, Gibbons HS, Lo CC, Munk AC, Rosenzweig CN, Koroleva GI, Palacios GF, Redden CL, Xu Y, Minogue TD, Chain PS. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y.?pestis, Y.?pseudotuberculosis, and Y.?enterocolitica. Genome Announc. 2015 Apr 30; 3(2). PMID: 25931590.
      Citations:    
    66. Johnson SL, Daligault HE, Davenport KW, Jaissle J, Frey KG, Ladner JT, Broomall SM, Bishop-Lilly KA, Bruce DC, Gibbons HS, Coyne SR, Lo CC, Meincke L, Munk AC, Koroleva GI, Rosenzweig CN, Palacios GF, Redden CL, Minogue TD, Chain PS. Complete genome sequences for 35 biothreat assay-relevant bacillus species. Genome Announc. 2015 Apr 30; 3(2). PMID: 25931591.
      Citations:    
    67. Johnson SL, Bishop-Lilly KA, Ladner JT, Daligault HE, Davenport KW, Jaissle J, Frey KG, Koroleva GI, Bruce DC, Coyne SR, Broomall SM, Li PE, Teshima H, Gibbons HS, Palacios GF, Rosenzweig CN, Redden CL, Xu Y, Minogue TD, Chain PS. Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor. Genome Announc. 2015 Apr 30; 3(2). PMID: 25931592.
      Citations:    
    68. Yu GY, Wiley MR, Kugelman JR, Ladner JT, Beitzel BF, Eccleston LT, Morazzani EM, Glass PJ, Palacios GF. Complete coding sequences of eastern equine encephalitis virus and venezuelan equine encephalitis virus strains isolated from human cases. Genome Announc. 2015 Apr 23; 3(2). PMID: 25908124.
      Citations:    
    69. Whitehouse CA, Ladner JT, Palacios GF. Molecular characterization of plasmid pMoma1of Moraxella macacae, a newly described bacterial pathogen of macaques. Folia Microbiol (Praha). 2015 May; 60(3):235-9. PMID: 25398380.
      Citations: 2     Fields:    Translation:AnimalsCells
    70. Ladner JT, Wiley MR, Palacios G. Reply to "Expanding the conversation on high-throughput virome sequencing standards to include consideration of microbial contamination sources". mBio. 2014 Oct 28; 5(6):e02084. PMID: 25352625.
      Citations:    Fields:    Translation:Cells
    71. Davenport KW, Daligault HE, Minogue TD, Bruce DC, Chain PS, Coyne SR, Jaissle JG, Koroleva GI, Ladner JT, Li PE, Palacios GF, Scholz MB, Teshima H, Johnson SL. Draft Genome Assembly of Acinetobacter baumannii ATCC 19606. Genome Announc. 2014 Aug 21; 2(4). PMID: 25146140.
      Citations:    
    72. Ladner JT, Beitzel B, Chain PS, Davenport MG, Donaldson EF, Frieman M, Kugelman JR, Kuhn JH, O'Rear J, Sabeti PC, Wentworth DE, Wiley MR, Yu GY, Sozhamannan S, Bradburne C, Palacios G. Standards for sequencing viral genomes in the era of high-throughput sequencing. mBio. 2014 Jun 17; 5(3):e01360-14. PMID: 24939889.
      Citations: 56     Fields:    Translation:Cells
    73. Barshis DJ, Ladner JT, Oliver TA, Palumbi SR. Lineage-specific transcriptional profiles of Symbiodinium spp. unaltered by heat stress in a coral host. Mol Biol Evol. 2014 Jun; 31(6):1343-52. PMID: 24651035.
      Citations: 42     Fields:    Translation:AnimalsCells
    74. Ladner JT, Savji N, Lofts L, Travassos da Rosa A, Wiley MR, Gestole MC, Rosen GE, Guzman H, Vasconcelos PFC, Nunes MRT, J Kochel T, Lipkin WI, Tesh RB, Palacios G. Genomic and phylogenetic characterization of viruses included in the Manzanilla and Oropouche species complexes of the genus Orthobunyavirus, family Bunyaviridae. J Gen Virol. 2014 May; 95(Pt 5):1055-1066. PMID: 24558222.
      Citations: 30     Fields:    Translation:Cells
    75. Palacios G, Tesh RB, Savji N, Travassos da Rosa APA, Guzman H, Bussetti AV, Desai A, Ladner J, Sanchez-Seco M, Lipkin WI. Characterization of the Sandfly fever Naples species complex and description of a new Karimabad species complex (genus Phlebovirus, family Bunyaviridae). J Gen Virol. 2014 Feb; 95(Pt 2):292-300. PMID: 24096318.
      Citations: 24     Fields:    Translation:HumansCells
    76. Ladner JT, Whitehouse CA, Koroleva GI, Palacios GF. Genome Sequence of Moraxella macacae 0408225, a Novel Bacterial Species Isolated from a Cynomolgus Macaque with Epistaxis. Genome Announc. 2013 Jan; 1(1). PMID: 23409273.
      Citations:    
    77. Ladner JT, Welch TJ, Whitehouse CA, Palacios GF. Genome Sequence of Weissella ceti NC36, an Emerging Pathogen of Farmed Rainbow Trout in the United States. Genome Announc. 2013 Jan; 1(1). PMID: 23409274.
      Citations:    
    78. Barshis DJ, Ladner JT, Oliver TA, Seneca FO, Traylor-Knowles N, Palumbi SR. Genomic basis for coral resilience to climate change. Proc Natl Acad Sci U S A. 2013 Jan 22; 110(4):1387-92. PMID: 23297204.
      Citations: 226     Fields:    Translation:AnimalsCells
    79. Ladner JT, Barshis DJ, Palumbi SR. Protein evolution in two co-occurring types of Symbiodinium: an exploration into the genetic basis of thermal tolerance in Symbiodinium clade D. BMC Evol Biol. 2012 Nov 12; 12:217. PMID: 23145489.
      Citations: 42     Fields:    Translation:AnimalsCells
    80. De Wit P, Pespeni MH, Ladner JT, Barshis DJ, Seneca F, Jaris H, Therkildsen NO, Morikawa M, Palumbi SR. The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis. Mol Ecol Resour. 2012 Nov; 12(6):1058-67. PMID: 22931062.
      Citations: 75     Fields:    
    81. Ladner JT, Palumbi SR. Extensive sympatry, cryptic diversity and introgression throughout the geographic distribution of two coral species complexes. Mol Ecol. 2012 May; 21(9):2224-38. PMID: 22439812.
      Citations: 26     Fields:    Translation:AnimalsCells
    82. Willett CS, Ladner JT. Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence. BMC Evol Biol. 2009 Jun 23; 9:139. PMID: 19549324.
      Citations: 18     Fields:    Translation:AnimalsCells
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    RCMI CC is supported by the National Institute on Minority Health and Health Disparities, National Institutes of Health (NIH), through Grant Number U24MD015970. The contents of this site are solely the responsibility of the authors and do not necessarily represent the official views of the NIH

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