Themis Lazaridis to Thermodynamics
This is a "connection" page, showing publications Themis Lazaridis has written about Thermodynamics.
Connection Strength
3.277
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Li Z, Lazaridis T. Water at biomolecular binding interfaces. Phys Chem Chem Phys. 2007 Feb 07; 9(5):573-81.
Score: 0.266
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Mottamal M, Lazaridis T. Voltage-dependent energetics of alamethicin monomers in the membrane. Biophys Chem. 2006 Jun 20; 122(1):50-7.
Score: 0.254
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Li Z, Lazaridis T. Thermodynamics of buried water clusters at a protein-ligand binding interface. J Phys Chem B. 2006 Jan 26; 110(3):1464-75.
Score: 0.252
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Mottamal M, Lazaridis T. The contribution of C alpha-H...O hydrogen bonds to membrane protein stability depends on the position of the amide. Biochemistry. 2005 Feb 08; 44(5):1607-13.
Score: 0.235
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Li Z, Lazaridis T. The effect of water displacement on binding thermodynamics: concanavalin A. J Phys Chem B. 2005 Jan 13; 109(1):662-70.
Score: 0.234
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Lazaridis T, Karplus M. Thermodynamics of protein folding: a microscopic view. Biophys Chem. 2003; 100(1-3):367-95.
Score: 0.203
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Dixit M, Lazaridis T. Free energy of hydrophilic and hydrophobic pores in lipid bilayers by free energy perturbation of a restraint. J Chem Phys. 2020 Aug 07; 153(5):054101.
Score: 0.172
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Lazaridis T, Hummer G. Classical Molecular Dynamics with Mobile Protons. J Chem Inf Model. 2017 11 27; 57(11):2833-2845.
Score: 0.143
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Lipkin RB, Lazaridis T. Implicit Membrane Investigation of the Stability of Antimicrobial Peptide ?-Barrels and Arcs. J Membr Biol. 2015 Jun; 248(3):469-86.
Score: 0.116
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Rahaman A, Lazaridis T. A thermodynamic approach to alamethicin pore formation. Biochim Biophys Acta. 2014 May; 1838(5):1439-47.
Score: 0.112
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Rahaman A, Lazaridis T. A thermodynamic approach to alamethicin pore formation. Biochim Biophys Acta. 2014 Jan; 1838(1 Pt B):98-105.
Score: 0.107
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He Y, Prieto L, Lazaridis T. Modeling peptide binding to anionic membrane pores. J Comput Chem. 2013 Jun 30; 34(17):1463-75.
Score: 0.104
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Zhan H, Lazaridis T. Inclusion of lateral pressure/curvature stress effects in implicit membrane models. Biophys J. 2013 Feb 05; 104(3):643-54.
Score: 0.102
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Yuzlenko O, Lazaridis T. Membrane protein native state discrimination by implicit membrane models. J Comput Chem. 2013 Apr 05; 34(9):731-8.
Score: 0.101
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Yuzlenko O, Lazaridis T. Interactions between ionizable amino acid side chains at a lipid bilayer-water interface. J Phys Chem B. 2011 Nov 24; 115(46):13674-84.
Score: 0.094
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Prieto L, Lazaridis T. Computational studies of colicin insertion into membranes: the closed state. Proteins. 2011 Jan; 79(1):126-41.
Score: 0.087
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Mihajlovic M, Lazaridis T. Antimicrobial peptides bind more strongly to membrane pores. Biochim Biophys Acta. 2010 Aug; 1798(8):1494-502.
Score: 0.083
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Zhang J, Lazaridis T. Transmembrane helix association affinity can be modulated by flanking and noninterfacial residues. Biophys J. 2009 Jun 03; 96(11):4418-27.
Score: 0.079
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Mihajlovic M, Lazaridis T. Membrane-bound structure and energetics of alpha-synuclein. Proteins. 2008 Feb 15; 70(3):761-78.
Score: 0.073
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Mihajlovic M, Lazaridis T. Modeling fatty acid delivery from intestinal fatty acid binding protein to a membrane. Protein Sci. 2007 Sep; 16(9):2042-55.
Score: 0.070
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Ramos J, Lazaridis T. Energetic determinants of oligomeric state specificity in coiled coils. J Am Chem Soc. 2006 Dec 06; 128(48):15499-510.
Score: 0.067
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Mottamal M, Zhang J, Lazaridis T. Energetics of the native and non-native states of the glycophorin transmembrane helix dimer. Proteins. 2006 Mar 01; 62(4):996-1009.
Score: 0.063
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Mihajlovic M, Lazaridis T. Calculations of pH-dependent binding of proteins to biological membranes. J Phys Chem B. 2006 Feb 23; 110(7):3375-84.
Score: 0.063
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Lazaridis T, Mallik B, Chen Y. Implicit solvent simulations of DPC micelle formation. J Phys Chem B. 2005 Aug 11; 109(31):15098-106.
Score: 0.061
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Lazaridis T. Implicit solvent simulations of peptide interactions with anionic lipid membranes. Proteins. 2005 Feb 15; 58(3):518-27.
Score: 0.059
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Li Z, Lazaridis T. Thermodynamic contributions of the ordered water molecule in HIV-1 protease. J Am Chem Soc. 2003 Jun 04; 125(22):6636-7.
Score: 0.052
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Madeo J, Mihajlovic M, Lazaridis T, Gunner MR. Slow dissociation of a charged ligand: analysis of the primary quinone Q(A) site of photosynthetic bacterial reaction centers. J Am Chem Soc. 2011 Nov 02; 133(43):17375-85.
Score: 0.023