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Connection

Ranajeet Ghose to Protein Conformation

This is a "connection" page, showing publications Ranajeet Ghose has written about Protein Conformation.
Connection Strength

2.580
  1. Piserchio A, Dalby KN, Ghose R. Assignment of backbone resonances in a eukaryotic protein kinase - ERK2 as a representative example. Methods Mol Biol. 2012; 831:359-68.
    View in: PubMed
    Score: 0.372
  2. Eryilmaz E, Benach J, Su M, Seetharaman J, Dutta K, Wei H, Gottlieb P, Hunt JF, Ghose R. Structure and dynamics of the P7 protein from the bacteriophage phi 12. J Mol Biol. 2008 Oct 03; 382(2):402-22.
    View in: PubMed
    Score: 0.293
  3. Alphonse S, Banerjee A, Dantuluri S, Shuman S, Ghose R. NMR solution structures of Runella slithyformis RNA 2'-phosphotransferase Tpt1 provide insights into NAD+ binding and specificity. Nucleic Acids Res. 2021 09 27; 49(17):9607-9624.
    View in: PubMed
    Score: 0.183
  4. Piserchio A, Will N, Giles DH, Hajredini F, Dalby KN, Ghose R. Solution Structure of the Carboxy-Terminal Tandem Repeat Domain of Eukaryotic Elongation Factor 2 Kinase and Its Role in Substrate Recognition. J Mol Biol. 2019 07 12; 431(15):2700-2717.
    View in: PubMed
    Score: 0.155
  5. Ghose R. Nature of the Pre-Chemistry Ensemble in Mitogen-Activated Protein Kinases. J Mol Biol. 2019 01 18; 431(2):145-157.
    View in: PubMed
    Score: 0.151
  6. Alphonse S, Ghose R. Methyl NMR spectroscopy: Measurement of dynamics in viral RNA-directed RNA polymerases. Methods. 2018 09 15; 148:100-114.
    View in: PubMed
    Score: 0.145
  7. Will N, Lee K, Hajredini F, Giles DH, Abzalimov RR, Clarkson M, Dalby KN, Ghose R. Structural Dynamics of the Activation of Elongation Factor 2 Kinase by Ca2+-Calmodulin. J Mol Biol. 2018 08 17; 430(17):2802-2821.
    View in: PubMed
    Score: 0.145
  8. Piserchio A, Warthaka M, Kaoud TS, Callaway K, Dalby KN, Ghose R. Local destabilization, rigid body, and fuzzy docking facilitate the phosphorylation of the transcription factor Ets-1 by the mitogen-activated protein kinase ERK2. Proc Natl Acad Sci U S A. 2017 08 01; 114(31):E6287-E6296.
    View in: PubMed
    Score: 0.137
  9. Alphonse S, Ghose R. Cystoviral RNA-directed RNA polymerases: Regulation of RNA synthesis on multiple time and length scales. Virus Res. 2017 04 15; 234:135-152.
    View in: PubMed
    Score: 0.132
  10. Will N, Piserchio A, Snyder I, Ferguson SB, Giles DH, Dalby KN, Ghose R. Structure of the C-Terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase. Biochemistry. 2016 09 27; 55(38):5377-86.
    View in: PubMed
    Score: 0.129
  11. Alphonse S, Bhattacharya S, Wang H, Ghose R. Methyl Relaxation Measurements Reveal Patterns of Fast Dynamics in a Viral RNA-Directed RNA Polymerase. Biochemistry. 2015 Sep 29; 54(38):5828-38.
    View in: PubMed
    Score: 0.120
  12. Piserchio A, Ramakrishan V, Wang H, Kaoud TS, Arshava B, Dutta K, Dalby KN, Ghose R. Structural and Dynamic Features of F-recruitment Site Driven Substrate Phosphorylation by ERK2. Sci Rep. 2015 Jun 08; 5:11127.
    View in: PubMed
    Score: 0.118
  13. Alphonse S, Arnold JJ, Bhattacharya S, Wang H, Kloss B, Cameron CE, Ghose R. Cystoviral polymerase complex protein P7 uses its acidic C-terminal tail to regulate the RNA-directed RNA polymerase P2. J Mol Biol. 2014 Jul 15; 426(14):2580-93.
    View in: PubMed
    Score: 0.110
  14. Piserchio A, Nair PA, Shuman S, Ghose R. Solution NMR studies of Chlorella virus DNA ligase-adenylate. J Mol Biol. 2010 Jan 15; 395(2):291-308.
    View in: PubMed
    Score: 0.080
  15. Del Rio A, Dutta K, Chavez J, Ubarretxena-Belandia I, Ghose R. Solution structure and dynamics of the N-terminal cytosolic domain of rhomboid intramembrane protease from Pseudomonas aeruginosa: insights into a functional role in intramembrane proteolysis. J Mol Biol. 2007 Jan 05; 365(1):109-22.
    View in: PubMed
    Score: 0.065
  16. Pujato M, Navarro A, Versace R, Mancusso R, Ghose R, Tasayco ML. The pH-dependence of amide chemical shift of Asp/Glu reflects its pKa in intrinsically disordered proteins with only local interactions. Biochim Biophys Acta. 2006 Jul; 1764(7):1227-33.
    View in: PubMed
    Score: 0.063
  17. Del Rio A, Anand A, Ghose R. Detection of correlated dynamics on multiple timescales by measurement of the differential relaxation of zero- and double-quantum coherences involving sidechain methyl groups in proteins. J Magn Reson. 2006 May; 180(1):1-17.
    View in: PubMed
    Score: 0.062
  18. Majumdar A, Ghose R. Probing slow backbone dynamics in proteins using TROSY-based experiments to detect cross-correlated time-modulation of isotropic chemical shifts. J Biomol NMR. 2004 Mar; 28(3):213-27.
    View in: PubMed
    Score: 0.054
  19. Lee S, Warthaka M, Yan C, Kaoud TS, Piserchio A, Ghose R, Ren P, Dalby KN. A model of a MAPK?substrate complex in an active conformation: a computational and experimental approach. PLoS One. 2011 Apr 11; 6(4):e18594.
    View in: PubMed
    Score: 0.022
  20. Natarajan A, Ghose R, Hill JM. Structure and dynamics of ASC2, a pyrin domain-only protein that regulates inflammatory signaling. J Biol Chem. 2006 Oct 20; 281(42):31863-75.
    View in: PubMed
    Score: 0.016
  21. Ji H, Shekhtman A, Ghose R, McDonnell JM, Cowburn D. NMR determination that an extended BH3 motif of pro-apoptotic BID is specifically bound to BCL-XL. Magn Reson Chem. 2006 Jul; 44 Spec No:S101-7.
    View in: PubMed
    Score: 0.016
  22. Shekhtman A, Ghose R, Goger M, Cowburn D. NMR structure determination and investigation using a reduced proton (REDPRO) labeling strategy for proteins. FEBS Lett. 2002 Jul 31; 524(1-3):177-82.
    View in: PubMed
    Score: 0.012
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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