Qing Li to RNA, Messenger
This is a "connection" page, showing publications Qing Li has written about RNA, Messenger.
Connection Strength
4.458
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Yu Z, Lin J, Li QQ. Transcriptome Analyses of FY Mutants Reveal Its Role in mRNA Alternative Polyadenylation. Plant Cell. 2019 10; 31(10):2332-2352.
Score: 0.496
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Fu H, Yang D, Su W, Ma L, Shen Y, Ji G, Ye X, Wu X, Li QQ. Genome-wide dynamics of alternative polyadenylation in rice. Genome Res. 2016 12; 26(12):1753-1760.
Score: 0.407
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Wu X, Ji G, Li QQ. Prediction of plant mRNA polyadenylation sites. Methods Mol Biol. 2015; 1255:13-23.
Score: 0.360
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Xing D, Li QQ. RADPRE: a computational program for identification of differential mRNA processing including alternative polyadenylation. Methods Mol Biol. 2015; 1255:57-66.
Score: 0.360
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Liu M, Wu X, Li QQ. DNA/RNA hybrid primer mediated poly(A) tag library construction for Illumina sequencing. Methods Mol Biol. 2015; 1255:175-84.
Score: 0.360
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Cao J, Li QQ. Poly(A) tag library construction from 10 ng total RNA. Methods Mol Biol. 2015; 1255:185-94.
Score: 0.360
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Hunt AG, Li QQ. Preface. Polyadenylation in plants. Methods Mol Biol. 2015; 1255:v-vi.
Score: 0.360
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Hunt AG, Xing D, Li QQ. Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants. BMC Genomics. 2012 Nov 20; 13:641.
Score: 0.311
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Hunt AG, Xu R, Addepalli B, Rao S, Forbes KP, Meeks LR, Xing D, Mo M, Zhao H, Bandyopadhyay A, Dampanaboina L, Marion A, Von Lanken C, Li QQ. Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling. BMC Genomics. 2008 May 14; 9:220.
Score: 0.227
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Loke JC, Stahlberg EA, Strenski DG, Haas BJ, Wood PC, Li QQ. Compilation of mRNA polyadenylation signals in Arabidopsis revealed a new signal element and potential secondary structures. Plant Physiol. 2005 Jul; 138(3):1457-68.
Score: 0.186
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Lin J, Hung FY, Ye C, Hong L, Shih YH, Wu K, Li QQ. HDA6-dependent histone deacetylation regulates mRNA polyadenylation in Arabidopsis. Genome Res. 2020 10; 30(10):1407-1417.
Score: 0.133
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Hong L, Ye C, Lin J, Fu H, Wu X, Li QQ. Alternative polyadenylation is involved in auxin-based plant growth and development. Plant J. 2018 01; 93(2):246-258.
Score: 0.111
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Lin J, Xu R, Wu X, Shen Y, Li QQ. Role of cleavage and polyadenylation specificity factor 100: anchoring poly(A) sites and modulating transcription termination. Plant J. 2017 Sep; 91(5):829-839.
Score: 0.107
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Wu X, Ji G, Li QQ. Computational analysis of plant polyadenylation signals. Methods Mol Biol. 2015; 1255:3-11.
Score: 0.090
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Ma L, Pati PK, Liu M, Li QQ, Hunt AG. High throughput characterizations of poly(A) site choice in plants. Methods. 2014 May 01; 67(1):74-83.
Score: 0.081
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Li QQ, Skinner J, Bennett JE. Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment. BMC Mol Biol. 2012 Jun 29; 13:22.
Score: 0.076
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Zhao H, Zheng J, Li QQ. A novel plant in vitro assay system for pre-mRNA cleavage during 3'-end formation. Plant Physiol. 2011 Nov; 157(3):1546-54.
Score: 0.072
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Shen Y, Venu RC, Nobuta K, Wu X, Notibala V, Demirci C, Meyers BC, Wang GL, Ji G, Li QQ. Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing. Genome Res. 2011 Sep; 21(9):1478-86.
Score: 0.071
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Wu X, Liu M, Downie B, Liang C, Ji G, Li QQ, Hunt AG. Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation. Proc Natl Acad Sci U S A. 2011 Jul 26; 108(30):12533-8.
Score: 0.071
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Zheng J, Xing D, Wu X, Shen Y, Kroll DM, Ji G, Li QQ. Ratio-based analysis of differential mRNA processing and expression of a polyadenylation factor mutant pcfs4 using arabidopsis tiling microarray. PLoS One. 2011 Feb 25; 6(2):e14719.
Score: 0.069
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Xing D, Li QQ. Alternative polyadenylation and gene expression regulation in plants. Wiley Interdiscip Rev RNA. 2011 May-Jun; 2(3):445-58.
Score: 0.068
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Xing D, Zhao H, Li QQ. Arabidopsis CLP1-SIMILAR PROTEIN3, an ortholog of human polyadenylation factor CLP1, functions in gametophyte, embryo, and postembryonic development. Plant Physiol. 2008 Dec; 148(4):2059-69.
Score: 0.059
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Dong M, Ji G, Li QQ, Liang C. Extraction of poly(A) sites from large-scale RNA-Seq data. Methods Mol Biol. 2015; 1255:25-37.
Score: 0.023