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Connection

Richard Yanagihara to Molecular Sequence Data

This is a "connection" page, showing publications Richard Yanagihara has written about Molecular Sequence Data.
Connection Strength

1.433
  1. Gu SH, Markowski J, Kang HJ, Hejduk J, Sikorska B, Liberski PP, Yanagihara R. Boginia virus, a newfound hantavirus harbored by the Eurasian water shrew (Neomys fodiens) in Poland. Virol J. 2013 May 22; 10:160.
    View in: PubMed
    Score: 0.092
  2. Kang HJ, Kadjo B, Dubey S, Jacquet F, Yanagihara R. Molecular evolution of Azagny virus, a newfound hantavirus harbored by the West African pygmy shrew (Crocidura obscurior) in C?te d'Ivoire. Virol J. 2011 Jul 28; 8:373.
    View in: PubMed
    Score: 0.081
  3. Kang HJ, Arai S, Hope AG, Song JW, Cook JA, Yanagihara R. Genetic diversity and phylogeography of Seewis virus in the Eurasian common shrew in Finland and Hungary. Virol J. 2009 Nov 24; 6:208.
    View in: PubMed
    Score: 0.073
  4. Kang HJ, Bennett SN, Sumibcay L, Arai S, Hope AG, Mocz G, Song JW, Cook JA, Yanagihara R. Evolutionary insights from a genetically divergent hantavirus harbored by the European common mole (Talpa europaea). PLoS One. 2009 Jul 07; 4(7):e6149.
    View in: PubMed
    Score: 0.071
  5. Arai S, Ohdachi SD, Asakawa M, Kang HJ, Mocz G, Arikawa J, Okabe N, Yanagihara R. Molecular phylogeny of a newfound hantavirus in the Japanese shrew mole (Urotrichus talpoides). Proc Natl Acad Sci U S A. 2008 Oct 21; 105(42):16296-301.
    View in: PubMed
    Score: 0.067
  6. Song JW, Gu SH, Bennett SN, Arai S, Puorger M, Hilbe M, Yanagihara R. Seewis virus, a genetically distinct hantavirus in the Eurasian common shrew (Sorex araneus). Virol J. 2007 Oct 30; 4:114.
    View in: PubMed
    Score: 0.063
  7. Song JW, Baek LJ, Song KJ, Skrok A, Markowski J, Bratosiewicz-Wasik J, Kordek R, Liberski PP, Yanagihara R. Characterization of Tula virus from common voles (microtus arvalis) in Poland: evidence for geographic-specific phylogenetic clustering. Virus Genes. 2004 Oct; 29(2):239-47.
    View in: PubMed
    Score: 0.051
  8. Song JW, Gligic A, Yanagihara R. Identification of Tula hantavirus in Pitymys subterraneus captured in the Cacak region of Serbia-Yugoslavia. Int J Infect Dis. 2002 Mar; 6(1):31-6.
    View in: PubMed
    Score: 0.042
  9. Yu Q, Shiramizu B, Nerurkar VR, Hu N, Shikuma CM, Melish ME, Cascio K, Imrie A, Lu Y, Yanagihara R. TT virus: preferential distribution in CD19(+) peripheral blood mononuclear cells and lack of viral integration. J Med Virol. 2002 Feb; 66(2):276-84.
    View in: PubMed
    Score: 0.042
  10. Yu Q, Hu N, Lu Y, Nerurkar VR, Yanagihara R. Rapid acquisition of entire DNA polymerase gene of a novel herpesvirus from green turtle fibropapilloma by a genomic walking technique. J Virol Methods. 2001 Feb; 91(2):183-95.
    View in: PubMed
    Score: 0.039
  11. Lu Y, Aguirre AA, Work TM, Balazs GH, Nerurkar VR, Yanagihara R. Identification of a small, naked virus in tumor-like aggregates in cell lines derived from a green turtle, Chelonia mydas, with fibropapillomas. J Virol Methods. 2000 Apr; 86(1):25-33.
    View in: PubMed
    Score: 0.037
  12. Yu Q, Lu Y, Nerurkar VR, Yanagihara R. Amplification and analysis of DNA flanking known sequences of a novel herpesvirus from green turtles with fibropapilloma Brief report. Arch Virol. 2000; 145(12):2669-76.
    View in: PubMed
    Score: 0.037
  13. Nerurkar VR, Wu Z, Dashwood WM, Woodward CL, Zhang M, Detels R, Yanagihara R. Complete nef gene sequence of HIV type 1 subtype B' from professional plasma donors in the People's Republic of China. AIDS Res Hum Retroviruses. 1998 Mar 20; 14(5):461-4.
    View in: PubMed
    Score: 0.032
  14. Nerurkar VR, Nguyen HT, Woodward CL, Hoffmann PR, Dashwood WM, Long HT, Morens DM, Detels R, Yanagihara R. Sequence and phylogenetic analyses of HIV-1 infection in Vietnam: subtype E in commercial sex workers (CSW) and injection drug users (IDU). Cell Mol Biol (Noisy-le-grand). 1997 Nov; 43(7):959-68.
    View in: PubMed
    Score: 0.031
  15. Nerurkar VR, Nguyen HT, Dashwood WM, Hoffmann PR, Yin C, Morens DM, Kaplan AH, Detels R, Yanagihara R. HIV type 1 subtype E in commercial sex workers and injection drug users in southern Vietnam. AIDS Res Hum Retroviruses. 1996 Jun 10; 12(9):841-3.
    View in: PubMed
    Score: 0.029
  16. Song JW, Baek LJ, Nagle JW, Schlitter D, Yanagihara R. Genetic and phylogenetic analyses of hantaviral sequences amplified from archival tissues of deer mice (Peromyscus maniculatus nubiterrae) captured in the eastern United States. Arch Virol. 1996; 141(5):959-67.
    View in: PubMed
    Score: 0.028
  17. Song JW, Baek LJ, Gavrilovskaya IN, Mackow ER, Hjelle B, Yanagihara R. Sequence analysis of the complete S genomic segment of a newly identified hantavirus isolated from the white-footed mouse (Peromyscus leucopus): phylogenetic relationship with other sigmodontine rodent-borne hantaviruses. Virus Genes. 1996; 12(3):249-56.
    View in: PubMed
    Score: 0.028
  18. Nerurkar VR, Achiron A, Song KJ, Melland RR, Pinhas-Hamiel O, Melamed E, Shohat B, Yanagihara R. Human T-cell lymphotropic virus type I in Iranian-born Mashhadi Jews: genetic and phylogenetic evidence for common source of infection. J Med Virol. 1995 Apr; 45(4):361-6.
    View in: PubMed
    Score: 0.026
  19. Song KJ, Nerurkar VR, Pereira-Cortez AJ, Yamamoto M, Taguchi H, Miyoshi I, Yanagihara R. Sequence and phylogenetic analyses of human T cell lymphotropic virus type 1 from a Brazilian woman with adult T cell leukemia: comparison with virus strains from South America and the Caribbean basin. Am J Trop Med Hyg. 1995 Jan; 52(1):101-8.
    View in: PubMed
    Score: 0.026
  20. Yanagihara R, Saitou N, Nerurkar VR, Song KJ, Bastian I, Franchini G, Gajdusek DC. Molecular phylogeny and dissemination of human T-cell lymphotropic virus type I viewed within the context of primate evolution and human migration. Cell Mol Biol (Noisy-le-grand). 1995; 41 Suppl 1:S145-61.
    View in: PubMed
    Score: 0.026
  21. Nerurkar VR, Song KJ, Bastian IB, Garin B, Franchini G, Yanagihara R. Genotyping of human T cell lymphotropic virus type I using Australo-Melanesian topotype-specific oligonucleotide primer-based polymerase chain reaction: insights into viral evolution and dissemination. J Infect Dis. 1994 Dec; 170(6):1353-60.
    View in: PubMed
    Score: 0.026
  22. Nerurkar VR, Song JW, Song KJ, Nagle JW, Hjelle B, Jenison S, Yanagihara R. Genetic evidence for a hantavirus enzootic in deer mice (Peromyscus maniculatus) captured a decade before the recognition of hantavirus pulmonary syndrome. Virology. 1994 Nov 01; 204(2):563-8.
    View in: PubMed
    Score: 0.026
  23. Lee JG, Gu SH, Baek LJ, Shin OS, Park KS, Kim HC, Klein TA, Yanagihara R, Song JW. Muju virus, harbored by Myodes regulus in Korea, might represent a genetic variant of Puumala virus, the prototype arvicolid rodent-borne hantavirus. Viruses. 2014 Apr 14; 6(4):1701-14.
    View in: PubMed
    Score: 0.025
  24. Nerurkar VR, Song KJ, Melland RR, Yanagihara R. Genetic and phylogenetic analyses of human T-cell lymphotropic virus type I variants from Melanesians with and without spastic myelopathy. Mol Neurobiol. 1994 Apr-Jun; 8(2-3):155-73.
    View in: PubMed
    Score: 0.025
  25. Song KJ, Nerurkar VR, Saitou N, Lazo A, Blakeslee JR, Miyoshi I, Yanagihara R. Genetic analysis and molecular phylogeny of simian T-cell lymphotropic virus type I: evidence for independent virus evolution in Asia and Africa. Virology. 1994 Feb 15; 199(1):56-66.
    View in: PubMed
    Score: 0.024
  26. Yanagihara R. Geographic-specific genotypes or topotypes of human T-cell lymphotropic virus type I as markers for early and recent migrations of human populations. Adv Virus Res. 1994; 43:147-86.
    View in: PubMed
    Score: 0.024
  27. Hoshino H, Nakamura T, Tanaka Y, Miyoshi I, Yanagihara R. Functional conservation of the neutralizing domains on the external envelope glycoprotein of cosmopolitan and melanesian strains of human T cell leukemia/lymphoma virus type I. J Infect Dis. 1993 Dec; 168(6):1368-73.
    View in: PubMed
    Score: 0.024
  28. Nerurkar VR, Babu PG, Song KJ, Melland RR, Gnanamuthu C, Saraswathi NK, Chandy M, Godec MS, John TJ, Yanagihara R. Sequence analysis of human T cell lymphotropic virus type I strains from southern India: gene amplification and direct sequencing from whole blood blotted onto filter paper. J Gen Virol. 1993 Dec; 74 ( Pt 12):2799-805.
    View in: PubMed
    Score: 0.024
  29. Nerurkar VR, Song KJ, Saitou N, Melland RR, Yanagihara R. Interfamilial and intrafamilial genomic diversity and molecular phylogeny of human T-cell lymphotropic virus type I from Papua New Guinea and the Solomon Islands. Virology. 1993 Oct; 196(2):506-13.
    View in: PubMed
    Score: 0.024
  30. Noh JY, Cheong HJ, Song JY, Kim WJ, Song KJ, Klein TA, Lee SH, Yanagihara R, Song JW. Clinical and molecular epidemiological features of hemorrhagic fever with renal syndrome in Korea over a 10-year period. J Clin Virol. 2013 Sep; 58(1):11-7.
    View in: PubMed
    Score: 0.023
  31. Nerurkar VA, Yanagihara R. Specificity of an oligonucleotide primer pair and of a single-base substitution in the amplification and detection of env gene sequences of HTLV-I variants from Papua New Guinea and the Solomon Islands. AIDS Res Hum Retroviruses. 1992 Jul; 8(7):1199-200.
    View in: PubMed
    Score: 0.022
  32. Nerurkar VR, Miller MA, Leon-Monzon ME, Ajdukiewicz AB, Jenkins CL, Sanders RC, Godec MS, Garruto RM, Yanagihara R. Failure to isolate human T cell lymphotropic virus type I and to detect variant-specific genomic sequences by polymerase chain reaction in Melanesians with indeterminate western immunoblot. J Gen Virol. 1992 Jul; 73 ( Pt 7):1805-10.
    View in: PubMed
    Score: 0.022
  33. Arai S, Gu SH, Baek LJ, Tabara K, Bennett SN, Oh HS, Takada N, Kang HJ, Tanaka-Taya K, Morikawa S, Okabe N, Yanagihara R, Song JW. Divergent ancestral lineages of newfound hantaviruses harbored by phylogenetically related crocidurine shrew species in Korea. Virology. 2012 Mar 15; 424(2):99-105.
    View in: PubMed
    Score: 0.021
  34. Lal RB, Rudolph DL, Nerurkar VR, Yanagihara R. Humoral responses to the immunodominant gag and env epitopes of human T-lymphotropic virus type I among Melanesians. Viral Immunol. 1992; 5(4):265-72.
    View in: PubMed
    Score: 0.021
  35. Gu SH, Kang HJ, Baek LJ, Noh JY, Kim HC, Klein TA, Yanagihara R, Song JW. Genetic diversity of Imjin virus in the Ussuri white-toothed shrew (Crocidura lasiura) in the Republic of Korea, 2004-2010. Virol J. 2011 Feb 08; 8:56.
    View in: PubMed
    Score: 0.020
  36. Song KJ, Baek LJ, Moon S, Ha SJ, Kim SH, Park KS, Klein TA, Sames W, Kim HC, Lee JS, Yanagihara R, Song JW. Muju virus, a novel hantavirus harboured by the arvicolid rodent Myodes regulus in Korea. J Gen Virol. 2007 Nov; 88(Pt 11):3121-3129.
    View in: PubMed
    Score: 0.016
  37. Baek LJ, Kariwa H, Lokugamage K, Yoshimatsu K, Arikawa J, Takashima I, Kang JI, Moon SS, Chung SY, Kim EJ, Kang HJ, Song KJ, Klein TA, Yanagihara R, Song JW. Soochong virus: an antigenically and genetically distinct hantavirus isolated from Apodemus peninsulae in Korea. J Med Virol. 2006 Feb; 78(2):290-7.
    View in: PubMed
    Score: 0.014
  38. Friedlaender J, Schurr T, Gentz F, Koki G, Friedlaender F, Horvat G, Babb P, Cerchio S, Kaestle F, Schanfield M, Deka R, Yanagihara R, Merriwether DA. Expanding Southwest Pacific mitochondrial haplogroups P and Q. Mol Biol Evol. 2005 Jun; 22(6):1506-17.
    View in: PubMed
    Score: 0.013
  39. Lorenzo E, Colon MC, Almodovar S, Maldonado IM, Gonzalez S, Costa SE, Hill MD, Mendoza R, Sepulveda G, Yanagihara R, Nerurkar V, Kumar R, Yamamura Y, Scott WA, Kumar A. Influence of CD4+ T cell counts on viral evolution in HIV-infected individuals undergoing suppressive HAART. Virology. 2004 Dec 05; 330(1):116-26.
    View in: PubMed
    Score: 0.013
  40. Cubitt CL, Cui X, Agostini HT, Nerurkar VR, Scheirich I, Yanagihara R, Ryschkewitsch CF, Stoner GL. Predicted amino acid sequences for 100 JCV strains. J Neurovirol. 2001 Aug; 7(4):339-44.
    View in: PubMed
    Score: 0.010
  41. Lin CL, Kyono W, Tongson J, Chua PK, Easa D, Yanagihara R, Nerurkar VR. Fecal excretion of a novel human circovirus, TT virus, in healthy children. Clin Diagn Lab Immunol. 2000 Nov; 7(6):960-3.
    View in: PubMed
    Score: 0.010
  42. Song JW, Baek LJ, Kim SH, Kho EY, Kim JH, Yanagihara R, Song KJ. Genetic diversity of Apodemus agrarius-borne hantaan virus in Korea. Virus Genes. 2000 Oct; 21(3):227-32.
    View in: PubMed
    Score: 0.010
  43. Ryschkewitsch CF, Friedlaender JS, Mgone CS, Jobes DV, Agostini HT, Chima SC, Alpers MP, Koki G, Yanagihara R, Stoner GL. Human polyomavirus JC variants in Papua New Guinea and Guam reflect ancient population settlement and viral evolution. Microbes Infect. 2000 Jul; 2(9):987-96.
    View in: PubMed
    Score: 0.009
  44. Ohkura S, Yanagihara R, Yamashita M, Hayami M. Phylogenetic relatedness of HTLV type I from Bellona, a Polynesian outlier within the Solomon Islands, to HTLV type I from Japan and far Eastern Asia. AIDS Res Hum Retroviruses. 1999 Jul 20; 15(11):1041-5.
    View in: PubMed
    Score: 0.009
  45. Kordek R, Nerurkar VR, Liberski PP, Isaacson S, Yanagihara R, Gajdusek DC. Heightened expression of tumor necrosis factor alpha, interleukin 1 alpha, and glial fibrillary acidic protein in experimental Creutzfeldt-Jakob disease in mice. Proc Natl Acad Sci U S A. 1996 Sep 03; 93(18):9754-8.
    View in: PubMed
    Score: 0.007
  46. Hjelle B, Lee SW, Song W, Torrez-Martinez N, Song JW, Yanagihara R, Gavrilovskaya I, Mackow ER. Molecular linkage of hantavirus pulmonary syndrome to the white-footed mouse, Peromyscus leucopus: genetic characterization of the M genome of New York virus. J Virol. 1995 Dec; 69(12):8137-41.
    View in: PubMed
    Score: 0.007
  47. Figlewicz DA, Garruto RM, Krizus A, Yanagihara R, Rouleau GA. The Cu/Zn superoxide dismutase gene in ALS and parkinsonism-dementia of Guam. Neuroreport. 1994 Jan 31; 5(5):557-60.
    View in: PubMed
    Score: 0.006
  48. Rajc?ni J, Yanagihara R, Godec MS, Nagle JW, Kudelova M, Asher DM. Low-incidence latent infection with variant B or roseola type human herpesvirus 6 in leukocytes of healthy adults. Arch Virol. 1994; 134(3-4):357-68.
    View in: PubMed
    Score: 0.006
  49. Sherman MP, Dube S, Spicer TP, Kane TD, Love JL, Saksena NK, Iannone R, Gibbs CJ, Yanagihara R, Dube DK, et al. Sequence analysis of an immunogenic and neutralizing domain of the human T-cell lymphoma/leukemia virus type I gp46 surface membrane protein among various primate T-cell lymphoma/leukemia virus isolates including those from a patient with both HTLV-I-associated myelopathy and adult T-cell leukemia. Cancer Res. 1993 Dec 15; 53(24):6067-73.
    View in: PubMed
    Score: 0.006
  50. Taller AM, Xiao SY, Godec MS, Gligic A, Avsic-Zupanc T, Goldfarb LG, Yanagihara R, Asher DM. Belgrade virus, a cause of hemorrhagic fever with renal syndrome in the Balkans, is closely related to Dobrava virus of field mice. J Infect Dis. 1993 Sep; 168(3):750-3.
    View in: PubMed
    Score: 0.006
  51. Gessain A, Boeri E, Yanagihara R, Gallo RC, Franchini G. Complete nucleotide sequence of a highly divergent human T-cell leukemia (lymphotropic) virus type I (HTLV-I) variant from melanesia: genetic and phylogenetic relationship to HTLV-I strains from other geographical regions. J Virol. 1993 Feb; 67(2):1015-23.
    View in: PubMed
    Score: 0.006
  52. Saksena NK, Sherman MP, Yanagihara R, Dube DK, Poiesz BJ. LTR sequence and phylogenetic analyses of a newly discovered variant of HTLV-I isolated from the Hagahai of Papua New Guinea. Virology. 1992 Jul; 189(1):1-9.
    View in: PubMed
    Score: 0.005
  53. Sherman MP, Saksena NK, Dube DK, Yanagihara R, Poiesz BJ. Evolutionary insights on the origin of human T-cell lymphoma/leukemia virus type I (HTLV-I) derived from sequence analysis of a new HTLV-I variant from Papua New Guinea. J Virol. 1992 Apr; 66(4):2556-63.
    View in: PubMed
    Score: 0.005
  54. Gessian A, Yanagihara R, Franchini G, Garruto RM, Jenkins CL, Ajdukiewicz AB, Gallo RC, Gajdusek DC. Highly divergent molecular variants of human T-lymphotropic virus type I from isolated populations in Papua New Guinea and the Solomon Islands. Proc Natl Acad Sci U S A. 1991 Sep 01; 88(17):7694-8.
    View in: PubMed
    Score: 0.005
Connection Strength

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