Jianhua Ruan to Arabidopsis
This is a "connection" page, showing publications Jianhua Ruan has written about Arabidopsis.
Connection Strength
1.976
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Najnin T, Saimon SH, Sunter G, Ruan J. A Network-Based Approach for Improving Annotation of Transcription Factor Functions and Binding Sites in Arabidopsis thaliana. Genes (Basel). 2023 01 21; 14(2).
Score: 0.801
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Gao Z, Zhao R, Ruan J. A genome-wide cis-regulatory element discovery method based on promoter sequences and gene co-expression networks. BMC Genomics. 2013; 14 Suppl 1:S4.
Score: 0.400
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Ruan J, Perez J, Hernandez B, Lei C, Sunter G, Sponsel VM. Systematic identification of functional modules and cis-regulatory elements in Arabidopsis thaliana. BMC Bioinformatics. 2011 Nov 24; 12 Suppl 12:S2.
Score: 0.369
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Williams J, Regedanz E, Lucinda N, Nava Fereira AR, Lacatus G, Berger M, O'Connell N, Coursey T, Ruan J, Bisaro DM, Sunter G. Mutation of the conserved late element in geminivirus CP promoters abolishes Arabidopsis TCP24 transcription factor binding and decreases H3K27me3 levels on viral chromatin. PLoS Pathog. 2024 Jul; 20(7):e1012399.
Score: 0.222
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Zhou X, Ruan J, Wang G, Zhang W. Characterization and identification of microRNA core promoters in four model species. PLoS Comput Biol. 2007 Mar 09; 3(3):e37.
Score: 0.066
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Ruan J, Zhang W. CAGER: classification analysis of gene expression regulation using multiple information sources. BMC Bioinformatics. 2005 May 12; 6:114.
Score: 0.059
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Zhang W, Ruan J, Ho TH, You Y, Yu T, Quatrano RS. Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana. Bioinformatics. 2005 Jul 15; 21(14):3074-81.
Score: 0.059