3517 Cullen Blvd. Science & Engineering Research Center (SERC) Bldg 545, Suite 3007.
Hall-Swan S, Slone J, Rigo MM, Antunes DA, Liz?e G, Kavraki LE
Hall-Swan S, Slone J, Rigo MM, Antunes DA, Liz?e G, Kavraki LE. PepSim: T-cell cross-reactivity prediction via comparison of peptide sequence and peptide-HLA structure. Front Immunol. 2023; 14:1108303.
PepSim: T-cell cross-reactivity prediction via comparison of peptide sequence and peptide-HLA structure.
Soon CF, Zhang S, Suneetha PV, Antunes DA, Manns MP, Raha S, Schultze-Florey C, Prinz I, Wedemeyer H, S?llberg Chen M, Cornberg M
Soon CF, Zhang S, Suneetha PV, Antunes DA, Manns MP, Raha S, Schultze-Florey C, Prinz I, Wedemeyer H, S?llberg Chen M, Cornberg M. Hepatitis E Virus (HEV)-Specific T Cell Receptor Cross-Recognition: Implications for Immunotherapy. Front Immunol. 2019; 10:2076.
Hepatitis E Virus (HEV)-Specific T Cell Receptor Cross-Recognition: Implications for Immunotherapy.
Hall-Swan S, Antunes DA, Devaurs D, Rigo MM, Kavraki LE, Zanatta G
bioRxiv : the preprint server for biology
Hall-Swan S, Antunes DA, Devaurs D, Rigo MM, Kavraki LE, Zanatta G. DINC-COVID: A webserver for ensemble docking with flexible SARS-CoV-2 proteins. bioRxiv. 2021 Jan 22.
DINC-COVID: A webserver for ensemble docking with flexible SARS-CoV-2 proteins.
Arns T, Antunes DA, Abella JR, Rigo MM, Kavraki LE, Giuliatti S, Donadi EA
Arns T, Antunes DA, Abella JR, Rigo MM, Kavraki LE, Giuliatti S, Donadi EA. Structural Modeling and Molecular Dynamics of the Immune Checkpoint Molecule HLA-G. Front Immunol. 2020; 11:575076.
Structural Modeling and Molecular Dynamics of the Immune Checkpoint Molecule HLA-G.
Fasoulis R, Rigo MM, Liz?e G, Antunes DA, Kavraki LE
Journal of chemical information and modeling
Fasoulis R, Rigo MM, Liz?e G, Antunes DA, Kavraki LE. APE-Gen2.0: Expanding Rapid Class I Peptide-Major Histocompatibility Complex Modeling to Post-Translational Modifications and Noncanonical Peptide Geometries. J Chem Inf Model. 2024 03 11; 64(5):1730-1750.
APE-Gen2.0: Expanding Rapid Class I Peptide-Major Histocompatibility Complex Modeling to Post-Translational Modifications and Noncanonical Peptide Geometries.
Antunes DA, Baker BM, Cornberg M, Selin LK
Antunes DA, Baker BM, Cornberg M, Selin LK. Editorial: Quantification and prediction of T-cell cross-reactivity through experimental and computational methods. Front Immunol. 2024; 15:1377259.
Editorial: Quantification and prediction of T-cell cross-reactivity through experimental and computational methods.
Bebis G, Kato M, Kohandel M, Wilkie K, Antunes DA, Chen K, Dou J
Bebis G, Kato M, Kohandel M, Wilkie K, Antunes DA, Chen K, Dou J. Editorial: Advances in mathematical and computational oncology, volume III. Front Oncol. 2023; 13:1282882.
Editorial: Advances in mathematical and computational oncology, volume III.
Antunes DA, Rigo MM, Silva JP, Cibulski SP, Sinigaglia M, Chies JA, Vieira GF
Antunes DA, Rigo MM, Silva JP, Cibulski SP, Sinigaglia M, Chies JA, Vieira GF. Structural in silico analysis of cross-genotype-reactivity among naturally occurring HCV NS3-1073-variants in the context of HLA-A*02:01 allele. Mol Immunol. 2011 Jul; 48(12-13):1461-7.
Structural in silico analysis of cross-genotype-reactivity among naturally occurring HCV NS3-1073-variants in the context of HLA-A*02:01 allele.
Wang B, Reville PK, Yassouf MY, Jelloul FZ, Ly C, Desai PN, Wang Z, Borges P, Veletic I, Dasdemir E, Burks JK, Tang G, Guo S, Garza AI, Nasnas C, Vaughn NR, Baran N, Deng Q, Matthews J, Gunaratne PH, Antunes DA, Ekmekcioglu S, Sasaki K, Garcia MB, Cuglievan B, Hao D, Daver N, Green MR, Konopleva M, Futreal A, Post SM, Abbas HA
Wang B, Reville PK, Yassouf MY, Jelloul FZ, Ly C, Desai PN, Wang Z, Borges P, Veletic I, Dasdemir E, Burks JK, Tang G, Guo S, Garza AI, Nasnas C, Vaughn NR, Baran N, Deng Q, Matthews J, Gunaratne PH, Antunes DA, Ekmekcioglu S, Sasaki K, Garcia MB, Cuglievan B, Hao D, Daver N, Green MR, Konopleva M, Futreal A, Post SM, Abbas HA. Comprehensive characterization of IFN? signaling in acute myeloid leukemia reveals prognostic and therapeutic strategies. Nat Commun. 2024 Feb 28; 15(1):1821.
Comprehensive characterization of IFN? signaling in acute myeloid leukemia reveals prognostic and therapeutic strategies.
Fasoulis R, Rigo MM, Antunes DA, Paliouras G, Kavraki LE
Immunoinformatics (Amsterdam, Netherlands)
Fasoulis R, Rigo MM, Antunes DA, Paliouras G, Kavraki LE. Transfer learning improves pMHC kinetic stability and immunogenicity predictions. Immunoinformatics (Amst). 2024 Mar; 13.
Transfer learning improves pMHC kinetic stability and immunogenicity predictions.
Antunes DA, Vieira GF, Rigo MM, Cibulski SP, Sinigaglia M, Chies JA
Antunes DA, Vieira GF, Rigo MM, Cibulski SP, Sinigaglia M, Chies JA. Structural allele-specific patterns adopted by epitopes in the MHC-I cleft and reconstruction of MHC:peptide complexes to cross-reactivity assessment. PLoS One. 2010 Apr 26; 5(4):e10353.
Structural allele-specific patterns adopted by epitopes in the MHC-I cleft and reconstruction of MHC:peptide complexes to cross-reactivity assessment.
Rigo MM, Antunes DA, Cibulski SP, Sinigaglia M, Chies JA, Vieira GF
Frontiers in bioscience (Landmark edition)
Rigo MM, Antunes DA, Cibulski SP, Sinigaglia M, Chies JA, Vieira GF. Immunogenic epitopes of Hantaviruses' N protein are restricted to conserved regions. Front Biosci (Landmark Ed). 2012 01 01; 17(4):1582-8.
Immunogenic epitopes of Hantaviruses' N protein are restricted to conserved regions.
Antunes DA, Devaurs D, Kavraki LE. Understanding the challenges of protein flexibility in drug design. Expert Opin Drug Discov. 2015 Dec; 10(12):1301-13.
Understanding the challenges of protein flexibility in drug design.
Sinigaglia M, Antunes DA, Rigo MM, Chies JA, Vieira GF
Database : the journal of biological databases and curation
Sinigaglia M, Antunes DA, Rigo MM, Chies JA, Vieira GF. CrossTope: a curate repository of 3D structures of immunogenic peptide: MHC complexes. Database (Oxford). 2013; 2013:bat002.
CrossTope: a curate repository of 3D structures of immunogenic peptide: MHC complexes.
Lee SE, Wang F, Grefe M, Trujillo-Ocampo A, Ruiz-Vasquez W, Takahashi K, Abbas HA, Borges P, Antunes DA, Al-Atrash G, Daver N, Molldrem JJ, Futreal A, Garcia-Manero G, Im JS
Clinical cancer research : an official journal of the American Association for Cancer Research
Lee SE, Wang F, Grefe M, Trujillo-Ocampo A, Ruiz-Vasquez W, Takahashi K, Abbas HA, Borges P, Antunes DA, Al-Atrash G, Daver N, Molldrem JJ, Futreal A, Garcia-Manero G, Im JS. Immunologic Predictors for Clinical Responses during Immune Checkpoint Blockade in Patients with Myelodysplastic Syndromes. Clin Cancer Res. 2023 05 15; 29(10):1938-1951.
Immunologic Predictors for Clinical Responses during Immune Checkpoint Blockade in Patients with Myelodysplastic Syndromes.
Conev A, Rigo MM, Devaurs D, Fonseca AF, Kalavadwala H, de Freitas MV, Clementi C, Zanatta G, Antunes DA, Kavraki L
Conev A, Rigo MM, Devaurs D, Fonseca AF, Kalavadwala H, de Freitas MV, Clementi C, Zanatta G, Antunes DA, Kavraki L. EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. bioRxiv. 2023 Apr 28.
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles.
Fonseca AF, Antunes DA. CrossDome: an interactive R package to predict cross-reactivity risk using immunopeptidomics databases. Front Immunol. 2023; 14:1142573.
CrossDome: an interactive R package to predict cross-reactivity risk using immunopeptidomics databases.
Conev A, Rigo MM, Devaurs D, Fonseca AF, Kalavadwala H, de Freitas MV, Clementi C, Zanatta G, Antunes DA, Kavraki LE
Conev A, Rigo MM, Devaurs D, Fonseca AF, Kalavadwala H, de Freitas MV, Clementi C, Zanatta G, Antunes DA, Kavraki LE. EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. Brief Bioinform. 2023 07 20; 24(4).
Antunes DA, Schoeder CT, Baek M, Donadi EA
Antunes DA, Schoeder CT, Baek M, Donadi EA. Editorial: Structural modeling and computational analyses of immune system molecules. Front Immunol. 2023; 14:1274670.
Editorial: Structural modeling and computational analyses of immune system molecules.
Hall-Swan S, Devaurs D, Rigo MM, Antunes DA, Kavraki LE, Zanatta G
Hall-Swan S, Devaurs D, Rigo MM, Antunes DA, Kavraki LE, Zanatta G. DINC-COVID: A webserver for ensemble docking with flexible SARS-CoV-2 proteins. Comput Biol Med. 2021 12; 139:104943.
Devaurs D, Antunes DA, Hall-Swan S, Mitchell N, Moll M, Liz?e G, Kavraki LE
Devaurs D, Antunes DA, Hall-Swan S, Mitchell N, Moll M, Liz?e G, Kavraki LE. Using parallelized incremental meta-docking can solve the conformational sampling issue when docking large ligands to proteins. BMC Mol Cell Biol. 2019 09 05; 20(1):42.
Using parallelized incremental meta-docking can solve the conformational sampling issue when docking large ligands to proteins.
Alves CC, Arns T, Oliveira ML, Moreau P, Antunes DA, Castelli EC, Mendes-Junior CT, Giuliatti S, Donadi EA
Alves CC, Arns T, Oliveira ML, Moreau P, Antunes DA, Castelli EC, Mendes-Junior CT, Giuliatti S, Donadi EA. Computational and atomistic studies applied to the understanding of the structural and behavioral features of the immune checkpoint HLA-G molecule and gene. Hum Immunol. 2023 Aug; 84(8):374-383.
Computational and atomistic studies applied to the understanding of the structural and behavioral features of the immune checkpoint HLA-G molecule and gene.
Sonnemann HM, Pazdrak B, Antunes DA, Roszik J, Liz?e G
Biochimica et biophysica acta. Reviews on cancer
Sonnemann HM, Pazdrak B, Antunes DA, Roszik J, Liz?e G. Vestigial-like 1 (VGLL1): An ancient co-transcriptional activator linking wing, placenta, and tumor development. Biochim Biophys Acta Rev Cancer. 2023 05; 1878(3):188892.
Vestigial-like 1 (VGLL1): An ancient co-transcriptional activator linking wing, placenta, and tumor development.
Desai PN, Wang B, Fonseca A, Borges P, Jelloul FZ, Reville PK, Lee E, Ly C, Basi A, Root J, Baran N, Post SM, Deng Q, Sun H, Harmanci AO, Burks JK, Gomez JA, DiNardo CD, Daver NG, Alatrash G, Konopleva M, Green MR, Antunes DA, Futreal A, Hao D, Abbas HA
Desai PN, Wang B, Fonseca A, Borges P, Jelloul FZ, Reville PK, Lee E, Ly C, Basi A, Root J, Baran N, Post SM, Deng Q, Sun H, Harmanci AO, Burks JK, Gomez JA, DiNardo CD, Daver NG, Alatrash G, Konopleva M, Green MR, Antunes DA, Futreal A, Hao D, Abbas HA. Single-Cell Profiling of CD8+ T Cells in Acute Myeloid Leukemia Reveals a Continuous Spectrum of Differentiation and Clonal Hyperexpansion. Cancer Immunol Res. 2023 May 10.
Single-Cell Profiling of CD8+ T Cells in Acute Myeloid Leukemia Reveals a Continuous Spectrum of Differentiation and Clonal Hyperexpansion.
Klein S, Mischke J, Beruldsen F, Prinz I, Antunes DA, Cornberg M, Kraft ARM
Klein S, Mischke J, Beruldsen F, Prinz I, Antunes DA, Cornberg M, Kraft ARM. Individual Epitope-Specific CD8+ T Cell Immune Responses Are Shaped Differently during Chronic Viral Infection. Pathogens. 2023 May 14; 12(5).
Individual Epitope-Specific CD8+ T Cell Immune Responses Are Shaped Differently during Chronic Viral Infection.
Abella JR, Antunes D, Jackson K, Liz?e G, Clementi C, Kavraki LE
Proceedings of the National Academy of Sciences of the United States of America
Abella JR, Antunes D, Jackson K, Liz?e G, Clementi C, Kavraki LE. Markov state modeling reveals alternative unbinding pathways for peptide-MHC complexes. Proc Natl Acad Sci U S A. 2020 12 01; 117(48):30610-30618.
Markov state modeling reveals alternative unbinding pathways for peptide-MHC complexes.
International journal of molecular sciences
Devaurs D, Antunes DA, Kavraki LE. Revealing Unknown Protein Structures Using Computational Conformational Sampling Guided by Experimental Hydrogen-Exchange Data. Int J Mol Sci. 2018 Oct 31; 19(11).
Revealing Unknown Protein Structures Using Computational Conformational Sampling Guided by Experimental Hydrogen-Exchange Data.
Antunes DA, Abella JR, Hall-Swan S, Devaurs D, Conev A, Moll M, Liz?e G, Kavraki LE
Antunes DA, Abella JR, Hall-Swan S, Devaurs D, Conev A, Moll M, Liz?e G, Kavraki LE. HLA-Arena: A Customizable Environment for the Structural Modeling and Analysis of Peptide-HLA Complexes for Cancer Immunotherapy. JCO Clin Cancer Inform. 2020 07; 4:623-636.
HLA-Arena: A Customizable Environment for the Structural Modeling and Analysis of Peptide-HLA Complexes for Cancer Immunotherapy.
Antunes DA, Rigo MM, Freitas MV, Mendes MFA, Sinigaglia M, Liz?e G, Kavraki LE, Selin LK, Cornberg M, Vieira GF
Antunes DA, Rigo MM, Freitas MV, Mendes MFA, Sinigaglia M, Liz?e G, Kavraki LE, Selin LK, Cornberg M, Vieira GF. Interpreting T-Cell Cross-reactivity through Structure: Implications for TCR-Based Cancer Immunotherapy. Front Immunol. 2017; 8:1210.
Interpreting T-Cell Cross-reactivity through Structure: Implications for TCR-Based Cancer Immunotherapy.
Devaurs D, Antunes DA, Kavraki LE. Computational analysis of complement inhibitor compstatin using molecular dynamics. J Mol Model. 2020 Aug 12; 26(9):231.
Computational analysis of complement inhibitor compstatin using molecular dynamics.
Abella JR, Antunes DA, Clementi C, Kavraki LE
Abella JR, Antunes DA, Clementi C, Kavraki LE. Large-Scale Structure-Based Prediction of Stable Peptide Binding to Class I HLAs Using Random Forests. Front Immunol. 2020; 11:1583.
Large-Scale Structure-Based Prediction of Stable Peptide Binding to Class I HLAs Using Random Forests.
Conev A, Devaurs D, Rigo MM, Antunes DA, Kavraki LE
Conev A, Devaurs D, Rigo MM, Antunes DA, Kavraki LE. 3pHLA-score improves structure-based peptide-HLA binding affinity prediction. Sci Rep. 2022 06 24; 12(1):10749.
3pHLA-score improves structure-based peptide-HLA binding affinity prediction.
Rigo MM, Fasoulis R, Conev A, Hall-Swan S, Antunes DA, Kavraki LE
Rigo MM, Fasoulis R, Conev A, Hall-Swan S, Antunes DA, Kavraki LE. SARS-Arena: Sequence and Structure-Guided Selection of Conserved Peptides from SARS-related Coronaviruses for Novel Vaccine Development. Front Immunol. 2022; 13:931155.
SARS-Arena: Sequence and Structure-Guided Selection of Conserved Peptides from SARS-related Coronaviruses for Novel Vaccine Development.
Figueiredo DF, Antunes DA, Rigo MM, Mendes MF, Silva JP, Mayer FQ, Matte U, Giugliani R, Vieira GF, Sinigaglia M
Journal of molecular graphics & modelling
Figueiredo DF, Antunes DA, Rigo MM, Mendes MF, Silva JP, Mayer FQ, Matte U, Giugliani R, Vieira GF, Sinigaglia M. Lessons from molecular modeling human a-L-iduronidase. J Mol Graph Model. 2014 Nov; 54:107-13.
Lessons from molecular modeling human a-L-iduronidase.
Rigo MM, Antunes DA, Vaz de Freitas M, Fabiano de Almeida Mendes M, Meira L, Sinigaglia M, Vieira GF
Rigo MM, Antunes DA, Vaz de Freitas M, Fabiano de Almeida Mendes M, Meira L, Sinigaglia M, Vieira GF. DockTope: a Web-based tool for automated pMHC-I modelling. Sci Rep. 2015 Dec 17; 5:18413.
DockTope: a Web-based tool for automated pMHC-I modelling.
Zhang S, Bakshi RK, Suneetha PV, Fytili P, Antunes DA, Vieira GF, Jacobs R, Klade CS, Manns MP, Kraft AR, Wedemeyer H, Schlaphoff V, Cornberg M
Zhang S, Bakshi RK, Suneetha PV, Fytili P, Antunes DA, Vieira GF, Jacobs R, Klade CS, Manns MP, Kraft AR, Wedemeyer H, Schlaphoff V, Cornberg M. Frequency, Private Specificity, and Cross-Reactivity of Preexisting Hepatitis C Virus (HCV)-Specific CD8+ T Cells in HCV-Seronegative Individuals: Implications for Vaccine Responses. J Virol. 2015 Aug; 89(16):8304-17.
Frequency, Private Specificity, and Cross-Reactivity of Preexisting Hepatitis C Virus (HCV)-Specific CD8+ T Cells in HCV-Seronegative Individuals: Implications for Vaccine Responses.
Mendes MF, Antunes DA, Rigo MM, Sinigaglia M, Vieira GF
Mendes MF, Antunes DA, Rigo MM, Sinigaglia M, Vieira GF. Improved structural method for T-cell cross-reactivity prediction. Mol Immunol. 2015 Oct; 67(2 Pt B):303-10.
Improved structural method for T-cell cross-reactivity prediction.
Antunes DA, Rigo MM, Sinigaglia M, de Medeiros RM, Junqueira DM, Almeida SE, Vieira GF
Antunes DA, Rigo MM, Sinigaglia M, de Medeiros RM, Junqueira DM, Almeida SE, Vieira GF. New insights into the in silico prediction of HIV protease resistance to nelfinavir. PLoS One. 2014; 9(1):e87520.
New insights into the in silico prediction of HIV protease resistance to nelfinavir.
Antunes DA, Moll M, Devaurs D, Jackson KR, Liz?e G, Kavraki LE
Antunes DA, Moll M, Devaurs D, Jackson KR, Liz?e G, Kavraki LE. DINC 2.0: A New Protein-Peptide Docking Webserver Using an Incremental Approach. Cancer Res. 2017 11 01; 77(21):e55-e57.
DINC 2.0: A New Protein-Peptide Docking Webserver Using an Incremental Approach.
Antunes DA, Devaurs D, Moll M, Liz?e G, Kavraki LE
Antunes DA, Devaurs D, Moll M, Liz?e G, Kavraki LE. General Prediction of Peptide-MHC Binding Modes Using Incremental Docking: A Proof of Concept. Sci Rep. 2018 03 12; 8(1):4327.
General Prediction of Peptide-MHC Binding Modes Using Incremental Docking: A Proof of Concept.
Devaurs D, Antunes DA, Papanastasiou M, Moll M, Ricklin D, Lambris JD, Kavraki LE
Devaurs D, Antunes DA, Papanastasiou M, Moll M, Ricklin D, Lambris JD, Kavraki LE. Coarse-Grained Conformational Sampling of Protein Structure Improves the Fit to Experimental Hydrogen-Exchange Data. Front Mol Biosci. 2017; 4:13.
Coarse-Grained Conformational Sampling of Protein Structure Improves the Fit to Experimental Hydrogen-Exchange Data.
Journal of the American Society for Mass Spectrometry
Devaurs D, Antunes DA, Borysik AJ. Computational Modeling of Molecular Structures Guided by Hydrogen-Exchange Data. J Am Soc Mass Spectrom. 2022 Feb 02; 33(2):215-237.
Computational Modeling of Molecular Structures Guided by Hydrogen-Exchange Data.
Antunes DA, Abella JR, Devaurs D, Rigo MM, Kavraki LE
Antunes DA, Abella JR, Devaurs D, Rigo MM, Kavraki LE. Structure-based Methods for Binding Mode and Binding Affinity Prediction for Peptide-MHC Complexes. Curr Top Med Chem. 2018; 18(26):2239-2255.
Structure-based Methods for Binding Mode and Binding Affinity Prediction for Peptide-MHC Complexes.
Abella JR, Antunes DA, Clementi C, Kavraki LE. APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC Conformations. Molecules. 2019 Mar 02; 24(5).
APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC Conformations.
Devaurs D, Papanastasiou M, Antunes DA, Abella JR, Moll M, Ricklin D, Lambris JD, Kavraki LE
International journal of computational biology and drug design
Devaurs D, Papanastasiou M, Antunes DA, Abella JR, Moll M, Ricklin D, Lambris JD, Kavraki LE. Native State of Complement Protein C3d Analysed via Hydrogen Exchange and Conformational Sampling. Int J Comput Biol Drug Des. 2018; 11(1-2):90-113.
Native State of Complement Protein C3d Analysed via Hydrogen Exchange and Conformational Sampling.
Computational and structural biotechnology journal
Le HN, de Freitas MV, Antunes DA. Strengths and limitations of web servers for the modeling of TCRpMHC complexes. Comput Struct Biotechnol J. 2024 Dec; 23:2938-2948.
Strengths and limitations of web servers for the modeling of TCRpMHC complexes.
Alves CC, Lewis J, Antunes DA, Donadi EA
Alves CC, Lewis J, Antunes DA, Donadi EA. The Role of Vimentin Peptide Citrullination in the Structure and Dynamics of HLA-DRB1 Rheumatoid Arthritis Risk-Associated Alleles. Int J Mol Sci. 2024 Dec 24; 26(1).
The Role of Vimentin Peptide Citrullination in the Structure and Dynamics of HLA-DRB1 Rheumatoid Arthritis Risk-Associated Alleles.
Sapoval N, Aghazadeh A, Nute MG, Antunes DA, Balaji A, Baraniuk R, Barberan CJ, Dannenfelser R, Dun C, Edrisi M, Elworth RAL, Kille B, Kyrillidis A, Nakhleh L, Wolfe CR, Yan Z, Yao V, Treangen TJ
Sapoval N, Aghazadeh A, Nute MG, Antunes DA, Balaji A, Baraniuk R, Barberan CJ, Dannenfelser R, Dun C, Edrisi M, Elworth RAL, Kille B, Kyrillidis A, Nakhleh L, Wolfe CR, Yan Z, Yao V, Treangen TJ. Current progress and open challenges for applying deep learning across the biosciences. Nat Commun. 2022 04 01; 13(1):1728.
Current progress and open challenges for applying deep learning across the biosciences.
Jackson KR, Antunes DA, Talukder AH, Maleki AR, Amagai K, Salmon A, Katailiha AS, Chiu Y, Fasoulis R, Rigo MM, Abella JR, Melendez BD, Li F, Sun Y, Sonnemann HM, Belousov V, Frenkel F, Justesen S, Makaju A, Liu Y, Horn D, Lopez-Ferrer D, Huhmer AF, Hwu P, Roszik J, Hawke D, Kavraki LE, Liz?e G
Jackson KR, Antunes DA, Talukder AH, Maleki AR, Amagai K, Salmon A, Katailiha AS, Chiu Y, Fasoulis R, Rigo MM, Abella JR, Melendez BD, Li F, Sun Y, Sonnemann HM, Belousov V, Frenkel F, Justesen S, Makaju A, Liu Y, Horn D, Lopez-Ferrer D, Huhmer AF, Hwu P, Roszik J, Hawke D, Kavraki LE, Liz?e G. Charge-based interactions through peptide position 4 drive diversity of antigen presentation by human leukocyte antigen class I molecules. PNAS Nexus. 2022 Jul; 1(3):pgac124.
Charge-based interactions through peptide position 4 drive diversity of antigen presentation by human leukocyte antigen class I molecules.