Talima Pearson to Polymorphism, Single Nucleotide
This is a "connection" page, showing publications Talima Pearson has written about Polymorphism, Single Nucleotide.
Connection Strength
2.003
-
Price EP, Dale JL, Cook JM, Sarovich DS, Seymour ML, Ginther JL, Kaufman EL, Beckstrom-Sternberg SM, Mayo M, Kaestli M, Glass MB, Gee JE, Wuthiekanun V, Warner JM, Baker A, Foster JT, Tan P, Tuanyok A, Limmathurotsakul D, Peacock SJ, Currie BJ, Wagner DM, Keim P, Pearson T. Development and validation of Burkholderia pseudomallei-specific real-time PCR assays for clinical, environmental or forensic detection applications. PLoS One. 2012; 7(5):e37723.
Score: 0.327
-
Pearson T, Busch JD, Ravel J, Read TD, Rhoton SD, U'Ren JM, Simonson TS, Kachur SM, Leadem RR, Cardon ML, Van Ert MN, Huynh LY, Fraser CM, Keim P. Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing. Proc Natl Acad Sci U S A. 2004 Sep 14; 101(37):13536-41.
Score: 0.192
-
Cocking JH, Deberg M, Schupp J, Sahl J, Wiggins K, Porty A, Hornstra HM, Hepp C, Jardine C, Furstenau TN, Schulte-Hostedde A, Fofanov VY, Pearson T. Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples. Genomics. 2020 03; 112(2):1872-1878.
Score: 0.137
-
Fleshman A, Mullins K, Sahl J, Hepp C, Nieto N, Wiggins K, Hornstra H, Kelly D, Chan TC, Phetsouvanh R, Dittrich S, Panyanivong P, Paris D, Newton P, Richards A, Pearson T. Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity. Microb Genom. 2018 09; 4(9).
Score: 0.126
-
Olivas S, Hornstra H, Priestley RA, Kaufman E, Hepp C, Sonderegger DL, Handady K, Massung RF, Keim P, Kersh GJ, Pearson T. Massive dispersal of Coxiella burnetii among cattle across the United States. Microb Genom. 2016 08; 2(8):e000068.
Score: 0.110
-
Khmaladze E, Birdsell DN, Naumann AA, Hochhalter CB, Seymour ML, Nottingham R, Beckstrom-Sternberg SM, Beckstrom-Sternberg J, Nikolich MP, Chanturia G, Zhgenti E, Zakalashvili M, Malania L, Babuadze G, Tsertsvadze N, Abazashvili N, Kekelidze M, Tsanava S, Imnadze P, Ganz HH, Getz WM, Pearson O, Gajer P, Eppinger M, Ravel J, Wagner DM, Okinaka RT, Schupp JM, Keim P, Pearson T. Phylogeography of Bacillus anthracis in the country of Georgia shows evidence of population structuring and is dissimilar to other regional genotypes. PLoS One. 2014; 9(7):e102651.
Score: 0.095
-
Foster JT, Price LB, Beckstrom-Sternberg SM, Pearson T, Brown WD, Kiesling DM, Allen CA, Liu CM, Beckstrom-Sternberg J, Roberto FF, Keim P. Genotyping of Brucella species using clade specific SNPs. BMC Microbiol. 2012 Jun 19; 12:110.
Score: 0.082
-
Birdsell DN, Pearson T, Price EP, Hornstra HM, Nera RD, Stone N, Gruendike J, Kaufman EL, Pettus AH, Hurbon AN, Buchhagen JL, Harms NJ, Chanturia G, Gyuranecz M, Wagner DM, Keim PS. Melt analysis of mismatch amplification mutation assays (Melt-MAMA): a functional study of a cost-effective SNP genotyping assay in bacterial models. PLoS One. 2012; 7(3):e32866.
Score: 0.081
-
Hornstra HM, Priestley RA, Georgia SM, Kachur S, Birdsell DN, Hilsabeck R, Gates LT, Samuel JE, Heinzen RA, Kersh GJ, Keim P, Massung RF, Pearson T. Rapid typing of Coxiella burnetii. PLoS One. 2011; 6(11):e26201.
Score: 0.079
-
Price EP, Matthews MA, Beaudry JA, Allred JL, Schupp JM, Birdsell DN, Pearson T, Keim P. Cost-effective interrogation of single nucleotide polymorphisms using the mismatch amplification mutation assay and capillary electrophoresis. Electrophoresis. 2010 Dec; 31(23-24):3881-8.
Score: 0.074
-
Pearson T, Giffard P, Beckstrom-Sternberg S, Auerbach R, Hornstra H, Tuanyok A, Price EP, Glass MB, Leadem B, Beckstrom-Sternberg JS, Allan GJ, Foster JT, Wagner DM, Okinaka RT, Sim SH, Pearson O, Wu Z, Chang J, Kaul R, Hoffmaster AR, Brettin TS, Robison RA, Mayo M, Gee JE, Tan P, Currie BJ, Keim P. Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer. BMC Biol. 2009 Nov 18; 7:78.
Score: 0.069
-
Pearson T, Okinaka RT, Foster JT, Keim P. Phylogenetic understanding of clonal populations in an era of whole genome sequencing. Infect Genet Evol. 2009 Sep; 9(5):1010-9.
Score: 0.067
-
Kenefic LJ, Pearson T, Okinaka RT, Schupp JM, Wagner DM, Hoffmaster AR, Trim CB, Trim CP, Chung WK, Beaudry JA, Jiang L, Gajer P, Foster JT, Mead JI, Ravel J, Keim P. Pre-Columbian origins for North American anthrax. PLoS One. 2009; 4(3):e4813.
Score: 0.066
-
Vogler AJ, Birdsell D, Price LB, Bowers JR, Beckstrom-Sternberg SM, Auerbach RK, Beckstrom-Sternberg JS, Johansson A, Clare A, Buchhagen JL, Petersen JM, Pearson T, Vaissaire J, Dempsey MP, Foxall P, Engelthaler DM, Wagner DM, Keim P. Phylogeography of Francisella tularensis: global expansion of a highly fit clone. J Bacteriol. 2009 Apr; 191(8):2474-84.
Score: 0.065
-
Foster JT, Beckstrom-Sternberg SM, Pearson T, Beckstrom-Sternberg JS, Chain PS, Roberto FF, Hnath J, Brettin T, Keim P. Whole-genome-based phylogeny and divergence of the genus Brucella. J Bacteriol. 2009 Apr; 191(8):2864-70.
Score: 0.065
-
Okinaka RT, Henrie M, Hill KK, Lowery KS, Van Ert M, Pearson T, Schupp J, Kenefic L, Beaudry J, Hofstadler SA, Jackson PJ, Keim P. Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue. Emerg Infect Dis. 2008 Apr; 14(4):653-6.
Score: 0.061
-
Van Ert MN, Easterday WR, Simonson TS, U'Ren JM, Pearson T, Kenefic LJ, Busch JD, Huynh LY, Dukerich M, Trim CB, Beaudry J, Welty-Bernard A, Read T, Fraser CM, Ravel J, Keim P. Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain. J Clin Microbiol. 2007 Jan; 45(1):47-53.
Score: 0.056
-
Drees KP, Lorch JM, Puechmaille SJ, Parise KL, Wibbelt G, Hoyt JR, Sun K, Jargalsaikhan A, Dalannast M, Palmer JM, Lindner DL, Marm Kilpatrick A, Pearson T, Keim PS, Blehert DS, Foster JT. Phylogenetics of a Fungal Invasion: Origins and Widespread Dispersal of White-Nose Syndrome. mBio. 2017 12 12; 8(6).
Score: 0.030
-
Keim P, Grunow R, Vipond R, Grass G, Hoffmaster A, Birdsell DN, Klee SR, Pullan S, Antwerpen M, Bayer BN, Latham J, Wiggins K, Hepp C, Pearson T, Brooks T, Sahl J, Wagner DM. Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years. EBioMedicine. 2015 Nov; 2(11):1613-8.
Score: 0.026
-
Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS. Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus. PLoS One. 2015; 10(7):e0130955.
Score: 0.025
-
Birdsell DN, Johansson A, ?hrman C, Kaufman E, Molins C, Pearson T, Gyuranecz M, Naumann A, Vogler AJ, Myrtenn?s K, Larsson P, Forsman M, Sj?din A, Gillece JD, Schupp J, Petersen JM, Keim P, Wagner DM. Francisella tularensis subsp. tularensis group A.I, United States. Emerg Infect Dis. 2014 May; 20(5):861-5.
Score: 0.023
-
Price EP, Seymour ML, Sarovich DS, Latham J, Wolken SR, Mason J, Vincent G, Drees KP, Beckstrom-Sternberg SM, Phillippy AM, Koren S, Okinaka RT, Chung WK, Schupp JM, Wagner DM, Vipond R, Foster JT, Bergman NH, Burans J, Pearson T, Brooks T, Keim P. Molecular epidemiologic investigation of an anthrax outbreak among heroin users, Europe. Emerg Infect Dis. 2012 Aug; 18(8):1307-13.
Score: 0.021
-
Price LB, Stegger M, Hasman H, Aziz M, Larsen J, Andersen PS, Pearson T, Waters AE, Foster JT, Schupp J, Gillece J, Driebe E, Liu CM, Springer B, Zdovc I, Battisti A, Franco A, Zmudzki J, Schwarz S, Butaye P, Jouy E, Pomba C, Porrero MC, Ruimy R, Smith TC, Robinson DA, Weese JS, Arriola CS, Yu F, Laurent F, Keim P, Skov R, Aarestrup FM. Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock. mBio. 2012; 3(1).
Score: 0.020
-
Gillece JD, Schupp JM, Balajee SA, Harris J, Pearson T, Yan Y, Keim P, DeBess E, Marsden-Haug N, Wohrle R, Engelthaler DM, Lockhart SR. Whole genome sequence analysis of Cryptococcus gattii from the Pacific Northwest reveals unexpected diversity. PLoS One. 2011; 6(12):e28550.
Score: 0.020
-
Okinaka RT, Price EP, Wolken SR, Gruendike JM, Chung WK, Pearson T, Xie G, Munk C, Hill KK, Challacombe J, Ivins BE, Schupp JM, Beckstrom-Sternberg SM, Friedlander A, Keim P. An attenuated strain of Bacillus anthracis (CDC 684) has a large chromosomal inversion and altered growth kinetics. BMC Genomics. 2011 Sep 30; 12:477.
Score: 0.020
-
Bowers JR, Engelthaler DM, Ginther JL, Pearson T, Peacock SJ, Tuanyok A, Wagner DM, Currie BJ, Keim PS. BurkDiff: a real-time PCR allelic discrimination assay for Burkholderia pseudomallei and B. mallei. PLoS One. 2010 Nov 12; 5(11):e15413.
Score: 0.018
-
Simonson TS, Okinaka RT, Wang B, Easterday WR, Huynh L, U'Ren JM, Dukerich M, Zanecki SR, Kenefic LJ, Beaudry J, Schupp JM, Pearson T, Wagner DM, Hoffmaster A, Ravel J, Keim P. Bacillus anthracis in China and its relationship to worldwide lineages. BMC Microbiol. 2009 Apr 15; 9:71.
Score: 0.017
-
Kenefic LJ, Pearson T, Okinaka RT, Chung WK, Max T, Trim CP, Beaudry JA, Schupp JM, Van Ert MN, Marston CK, Gutierrez K, Swinford AK, Hoffmaster AR, Keim P. Texas isolates closely related to Bacillus anthracis Ames. Emerg Infect Dis. 2008 Sep; 14(9):1494-6.
Score: 0.016
-
Van Ert MN, Easterday WR, Huynh LY, Okinaka RT, Hugh-Jones ME, Ravel J, Zanecki SR, Pearson T, Simonson TS, U'Ren JM, Kachur SM, Leadem-Dougherty RR, Rhoton SD, Zinser G, Farlow J, Coker PR, Smith KL, Wang B, Kenefic LJ, Fraser-Liggett CM, Wagner DM, Keim P. Global genetic population structure of Bacillus anthracis. PLoS One. 2007 May 23; 2(5):e461.
Score: 0.014