Jason Ladner to Phylogeny
This is a "connection" page, showing publications Jason Ladner has written about Phylogeny.
Connection Strength
1.784
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Ladner JT, Savji N, Lofts L, Travassos da Rosa A, Wiley MR, Gestole MC, Rosen GE, Guzman H, Vasconcelos PFC, Nunes MRT, J Kochel T, Lipkin WI, Tesh RB, Palacios G. Genomic and phylogenetic characterization of viruses included in the Manzanilla and Oropouche species complexes of the genus Orthobunyavirus, family Bunyaviridae. J Gen Virol. 2014 May; 95(Pt 5):1055-1066.
Score: 0.387
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Willett CS, Ladner JT. Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence. BMC Evol Biol. 2009 Jun 23; 9:139.
Score: 0.280
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Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. mBio. 2020 09 04; 11(5).
Score: 0.152
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Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, Worobey M, Keim P, Caporaso JG. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000Res. 2020; 9:657.
Score: 0.150
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Jansen van Vuren P, Ladner JT, Grobbelaar AA, Wiley MR, Lovett S, Allam M, Ismail A, le Roux C, Weyer J, Moolla N, Storm N, Kgaladi J, Sanchez-Lockhart M, Conteh O, Palacios G, Paweska JT. Phylodynamic Analysis of Ebola Virus Disease Transmission in Sierra Leone. Viruses. 2019 01 16; 11(1).
Score: 0.136
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Tuanyok A, Mayo M, Scholz H, Hall CM, Allender CJ, Kaestli M, Ginther J, Spring-Pearson S, Bollig MC, Stone JK, Settles EW, Busch JD, Sidak-Loftis L, Sahl JW, Thomas A, Kreutzer L, Georgi E, Gee JE, Bowen RA, Ladner JT, Lovett S, Koroleva G, Palacios G, Wagner DM, Currie BJ, Keim P. Burkholderia humptydooensis sp. nov., a New Species Related to Burkholderia thailandensis and the Fifth Member of the Burkholderia pseudomallei Complex. Appl Environ Microbiol. 2017 03 01; 83(5).
Score: 0.119
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Ladner JT, Wiley MR, Beitzel B, Auguste AJ, Dupuis AP, Lindquist ME, Sibley SD, Kota KP, Fetterer D, Eastwood G, Kimmel D, Prieto K, Guzman H, Aliota MT, Reyes D, Brueggemann EE, St John L, Hyeroba D, Lauck M, Friedrich TC, O'Connor DH, Gestole MC, Cazares LH, Popov VL, Castro-Llanos F, Kochel TJ, Kenny T, White B, Ward MD, Loaiza JR, Goldberg TL, Weaver SC, Kramer LD, Tesh RB, Palacios G. A Multicomponent Animal Virus Isolated from Mosquitoes. Cell Host Microbe. 2016 Sep 14; 20(3):357-367.
Score: 0.115
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Kuhn JH, Wiley MR, Rodriguez SE, B?o Y, Prieto K, Travassos da Rosa AP, Guzman H, Savji N, Ladner JT, Tesh RB, Wada J, Jahrling PB, Bente DA, Palacios G. Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae). Viruses. 2016 06 10; 8(6).
Score: 0.113
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Ladner JT, Palumbi SR. Extensive sympatry, cryptic diversity and introgression throughout the geographic distribution of two coral species complexes. Mol Ecol. 2012 May; 21(9):2224-38.
Score: 0.085
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Su?rez-Esquivel M, Hern?ndez-Mora G, Ruiz-Villalobos N, Barquero-Calvo E, Chac?n-D?az C, Ladner JT, Oviedo-S?nchez G, Foster JT, Rojas-Campos N, Chaves-Olarte E, Thomson NR, Moreno E, Guzm?n-Verri C. Persistence of Brucella abortus lineages revealed by genomic characterization and phylodynamic analysis. PLoS Negl Trop Dis. 2020 04; 14(4):e0008235.
Score: 0.037
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Wiley MR, Fakoli L, Letizia AG, Welch SR, Ladner JT, Prieto K, Reyes D, Espy N, Chitty JA, Pratt CB, Di Paola N, Taweh F, Williams D, Saindon J, Davis WG, Patel K, Holland M, Negr?n D, Str?her U, Nichol ST, Sozhamannan S, Rollin PE, Dogba J, Nyenswah T, Bolay F, Albari?o CG, Fallah M, Palacios G. Lassa virus circulating in Liberia: a retrospective genomic characterisation. Lancet Infect Dis. 2019 12; 19(12):1371-1378.
Score: 0.036
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Grubaugh ND, Saraf S, Gangavarapu K, Watts A, Tan AL, Oidtman RJ, Ladner JT, Oliveira G, Matteson NL, Kraemer MUG, Vogels CBF, Hentoff A, Bhatia D, Stanek D, Scott B, Landis V, Stryker I, Cone MR, Kopp EW, Cannons AC, Heberlein-Larson L, White S, Gillis LD, Ricciardi MJ, Kwal J, Lichtenberger PK, Magnani DM, Watkins DI, Palacios G, Hamer DH, Gardner LM, Perkins TA, Baele G, Khan K, Morrison A, Isern S, Michael SF, Andersen KG. Travel Surveillance and Genomics Uncover a Hidden Zika Outbreak during the Waning Epidemic. Cell. 2019 08 22; 178(5):1057-1071.e11.
Score: 0.035
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Costa-da-Silva AL, Ioshino RS, Petersen V, Lima AF, Cunha MDP, Wiley MR, Ladner JT, Prieto K, Palacios G, Costa DD, Suesdek L, Zanotto PMA, Capurro ML. First report of naturally infected Aedes aegypti with chikungunya virus genotype ECSA in the Americas. PLoS Negl Trop Dis. 2017 Jun; 11(6):e0005630.
Score: 0.030
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Dudas G, Carvalho LM, Bedford T, Tatem AJ, Baele G, Faria NR, Park DJ, Ladner JT, Arias A, Asogun D, Bielejec F, Caddy SL, Cotten M, D'Ambrozio J, Dellicour S, Di Caro A, Diclaro JW, Duraffour S, Elmore MJ, Fakoli LS, Faye O, Gilbert ML, Gevao SM, Gire S, Gladden-Young A, Gnirke A, Goba A, Grant DS, Haagmans BL, Hiscox JA, Jah U, Kugelman JR, Liu D, Lu J, Malboeuf CM, Mate S, Matthews DA, Matranga CB, Meredith LW, Qu J, Quick J, Pas SD, Phan MVT, Pollakis G, Reusken CB, Sanchez-Lockhart M, Schaffner SF, Schieffelin JS, Sealfon RS, Simon-Loriere E, Smits SL, Stoecker K, Thorne L, Tobin EA, Vandi MA, Watson SJ, West K, Whitmer S, Wiley MR, Winnicki SM, Wohl S, W?lfel R, Yozwiak NL, Andersen KG, Blyden SO, Bolay F, Carroll MW, Dahn B, Diallo B, Formenty P, Fraser C, Gao GF, Garry RF, Goodfellow I, G?nther S, Happi CT, Holmes EC, Kargbo B, Ke?ta S, Kellam P, Koopmans MPG, Kuhn JH, Loman NJ, Magassouba N, Naidoo D, Nichol ST, Nyenswah T, Palacios G, Pybus OG, Sabeti PC, Sall A, Str?her U, Wurie I, Suchard MA, Lemey P, Rambaut A. Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nature. 2017 04 20; 544(7650):309-315.
Score: 0.030
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Folarin OA, Ehichioya D, Schaffner SF, Winnicki SM, Wohl S, Eromon P, West KL, Gladden-Young A, Oyejide NE, Matranga CB, Deme AB, James A, Tomkins-Tinch C, Onyewurunwa K, Ladner JT, Palacios G, Nosamiefan I, Andersen KG, Omilabu S, Park DJ, Yozwiak NL, Nasidi A, Garry RF, Tomori O, Sabeti PC, Happi CT. Ebola Virus Epidemiology and Evolution in Nigeria. J Infect Dis. 2016 10 15; 214(suppl 3):S102-S109.
Score: 0.028
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Palacios G, Wiley MR, Travassos da Rosa APA, Guzman H, Quiroz E, Savji N, Carrera JP, Bussetti AV, Ladner JT, Ian Lipkin W, Tesh RB. Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae). J Gen Virol. 2015 Aug; 96(8):2079-2085.
Score: 0.026
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Barshis DJ, Ladner JT, Oliver TA, Palumbi SR. Lineage-specific transcriptional profiles of Symbiodinium spp. unaltered by heat stress in a coral host. Mol Biol Evol. 2014 Jun; 31(6):1343-52.
Score: 0.024