Jon Lynch Lynch to Phenotype
This is a "connection" page, showing publications Jon Lynch Lynch has written about Phenotype.
Connection Strength
5.380
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Lynch JP. Rightsizing root phenotypes for drought resistance. J Exp Bot. 2018 06 06; 69(13):3279-3292.
Score: 0.543
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York LM, Lynch JP. Intensive field phenotyping of maize (Zea mays L.) root crowns identifies phenes and phene integration associated with plant growth and nitrogen acquisition. J Exp Bot. 2015 Sep; 66(18):5493-505.
Score: 0.441
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Lynch JP, Brown KM. New roots for agriculture: exploiting the root phenome. Philos Trans R Soc Lond B Biol Sci. 2012 Jun 05; 367(1595):1598-604.
Score: 0.358
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Lopez-Valdivia I, Yang X, Lynch JP. Large root cortical cells and reduced cortical cell files improve growth under suboptimal nitrogen in silico. Plant Physiol. 2023 07 03; 192(3):2261-2275.
Score: 0.193
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Sidhu JS, Ajmera I, Arya S, Lynch JP. RootSlice-A novel functional-structural model for root anatomical phenotypes. Plant Cell Environ. 2023 05; 46(5):1671-1690.
Score: 0.188
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Rangarajan H, Hadka D, Reed P, Lynch JP. Multi-objective optimization of root phenotypes for nutrient capture using evolutionary algorithms. Plant J. 2022 07; 111(1):38-53.
Score: 0.178
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Strock CF, Schneider HM, Lynch JP. Anatomics: High-throughput phenotyping of plant anatomy. Trends Plant Sci. 2022 06; 27(6):520-523.
Score: 0.177
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Ajmera I, Henry A, Radanielson AM, Klein SP, Ianevski A, Bennett MJ, Band LR, Lynch JP. Integrated root phenotypes for improved rice performance under low nitrogen availability. Plant Cell Environ. 2022 03; 45(3):805-822.
Score: 0.176
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Lynch JP. Harnessing root architecture to address global challenges. Plant J. 2022 01; 109(2):415-431.
Score: 0.173
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Saengwilai P, Strock C, Rangarajan H, Chimungu J, Salungyu J, Lynch JP. Root hair phenotypes influence nitrogen acquisition in maize. Ann Bot. 2021 11 09; 128(7):849-858.
Score: 0.172
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Liu S, Barrow CS, Hanlon M, Lynch JP, Bucksch A. DIRT/3D: 3D root phenotyping for field-grown maize (Zea mays). Plant Physiol. 2021 10 05; 187(2):739-757.
Score: 0.171
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Schneider HM, Strock CF, Hanlon MT, Vanhees DJ, Perkins AC, Ajmera IB, Sidhu JS, Mooney SJ, Brown KM, Lynch JP. Multiseriate cortical sclerenchyma enhance root penetration in compacted soils. Proc Natl Acad Sci U S A. 2021 02 09; 118(6).
Score: 0.164
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Strock CF, Lynch JP. Root secondary growth: an unexplored component of soil resource acquisition. Ann Bot. 2020 07 24; 126(2):205-218.
Score: 0.158
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Vanhees DJ, Loades KW, Bengough AG, Mooney SJ, Lynch JP. Root anatomical traits contribute to deeper rooting of maize under compacted field conditions. J Exp Bot. 2020 07 06; 71(14):4243-4257.
Score: 0.157
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Schneider HM, Klein SP, Hanlon MT, Nord EA, Kaeppler S, Brown KM, Warry A, Bhosale R, Lynch JP. Genetic control of root architectural plasticity in maize. J Exp Bot. 2020 05 30; 71(10):3185-3197.
Score: 0.156
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Klein SP, Schneider HM, Perkins AC, Brown KM, Lynch JP. Multiple Integrated Root Phenotypes Are Associated with Improved Drought Tolerance. Plant Physiol. 2020 07; 183(3):1011-1025.
Score: 0.155
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Galindo-Casta?eda T, Brown KM, Kuldau GA, Roth GW, Wenner NG, Ray S, Schneider H, Lynch JP. Root cortical anatomy is associated with differential pathogenic and symbiotic fungal colonization in maize. Plant Cell Environ. 2019 11; 42(11):2999-3014.
Score: 0.147
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Lynch JP. Root phenotypes for improved nutrient capture: an underexploited opportunity for global agriculture. New Phytol. 2019 07; 223(2):548-564.
Score: 0.143
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Rangarajan H, Postma JA, Lynch JP. Co-optimization of axial root phenotypes for nitrogen and phosphorus acquisition in common bean. Ann Bot. 2018 08 27; 122(3):485-499.
Score: 0.138
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AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, Graham C, Hirsch C, Holland JB, Hooker D, Kaeppler S, Knoll J, Lauter N, Lee EC, Lorenz A, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Rodriguez O, Schnable JC, Scully B, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Ertl D, Schnable PS, De Leon N, Spalding EP, Edwards J, Lawrence-Dill CJ. Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. BMC Res Notes. 2018 Jul 09; 11(1):452.
Score: 0.137
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Strock CF, Morrow de la Riva L, Lynch JP. Reduction in Root Secondary Growth as a Strategy for Phosphorus Acquisition. Plant Physiol. 2018 01; 176(1):691-703.
Score: 0.131
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Burridge JD, Schneider HM, Huynh BL, Roberts PA, Bucksch A, Lynch JP. Genome-wide association mapping and agronomic impact of cowpea root architecture. Theor Appl Genet. 2017 Feb; 130(2):419-431.
Score: 0.122
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Zhan A, Schneider H, Lynch JP. Reduced Lateral Root Branching Density Improves Drought Tolerance in Maize. Plant Physiol. 2015 Aug; 168(4):1603-15.
Score: 0.111
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Zhan A, Lynch JP. Reduced frequency of lateral root branching improves N capture from low-N soils in maize. J Exp Bot. 2015 Apr; 66(7):2055-65.
Score: 0.108
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Burton AL, Johnson JM, Foerster JM, Hirsch CN, Buell CR, Hanlon MT, Kaeppler SM, Brown KM, Lynch JP. QTL mapping and phenotypic variation for root architectural traits in maize (Zea mays L.). Theor Appl Genet. 2014 Nov; 127(11):2293-311.
Score: 0.105
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Bucksch A, Burridge J, York LM, Das A, Nord E, Weitz JS, Lynch JP. Image-based high-throughput field phenotyping of crop roots. Plant Physiol. 2014 Oct; 166(2):470-86.
Score: 0.105
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Lynch JP, Chimungu JG, Brown KM. Root anatomical phenes associated with water acquisition from drying soil: targets for crop improvement. J Exp Bot. 2014 Nov; 65(21):6155-66.
Score: 0.102
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Nord EA, Lynch JP. Plant phenology: a critical controller of soil resource acquisition. J Exp Bot. 2009; 60(7):1927-37.
Score: 0.072
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Zhu J, Mickelson SM, Kaeppler SM, Lynch JP. Detection of quantitative trait loci for seminal root traits in maize (Zea mays L.) seedlings grown under differential phosphorus levels. Theor Appl Genet. 2006 Jun; 113(1):1-10.
Score: 0.059
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Ho MD, McCannon BC, Lynch JP. Optimization modeling of plant root architecture for water and phosphorus acquisition. J Theor Biol. 2004 Feb 07; 226(3):331-40.
Score: 0.050
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Lopez-Valdivia I, Perkins AC, Schneider HM, Vallebueno-Estrada M, Burridge JD, Gonz?lez-Orozco E, Montufar A, Montiel R, Lynch JP, Vielle-Calzada JP. Gradual domestication of root traits in the earliest maize from Tehuac?n. Proc Natl Acad Sci U S A. 2022 04 26; 119(17):e2110245119.
Score: 0.044
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Rogers AR, Dunne JC, Romay C, Bohn M, Buckler ES, Ciampitti IA, Edwards J, Ertl D, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Hood E, Hooker DC, Knoll J, Lee EC, Lorenz A, Lynch JP, McKay J, Moose SP, Murray SC, Nelson R, Rocheford T, Schnable JC, Schnable PS, Sekhon R, Singh M, Smith M, Springer N, Thelen K, Thomison P, Thompson A, Tuinstra M, Wallace J, Wisser RJ, Xu W, Gilmour AR, Kaeppler SM, De Leon N, Holland JB. The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment. G3 (Bethesda). 2021 02 09; 11(2).
Score: 0.041
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Benes B, Guan K, Lang M, Long SP, Lynch JP, Marshall-Col?n A, Peng B, Schnable J, Sweetlove LJ, Turk MJ. Multiscale computational models can guide experimentation and targeted measurements for crop improvement. Plant J. 2020 07; 103(1):21-31.
Score: 0.039
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McFarland BA, AlKhalifah N, Bohn M, Bubert J, Buckler ES, Ciampitti I, Edwards J, Ertl D, Gage JL, Falcon CM, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, Hood E, Hooker D, Jarquin D, Kaeppler SM, Knoll J, Kruger G, Lauter N, Lee EC, Lima DC, Lorenz A, Lynch JP, McKay J, Miller ND, Moose SP, Murray SC, Nelson R, Poudyal C, Rocheford T, Rodriguez O, Romay MC, Schnable JC, Schnable PS, Scully B, Sekhon R, Silverstein K, Singh M, Smith M, Spalding EP, Springer N, Thelen K, Thomison P, Tuinstra M, Wallace J, Walls R, Wills D, Wisser RJ, Xu W, Yeh CT, de Leon N. Maize genomes to fields (G2F): 2014-2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets. BMC Res Notes. 2020 Feb 12; 13(1):71.
Score: 0.038
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Oyiga BC, Palczak J, Wojciechowski T, Lynch JP, Naz AA, L?on J, Ballvora A. Genetic components of root architecture and anatomy adjustments to water-deficit stress in spring barley. Plant Cell Environ. 2020 03; 43(3):692-711.
Score: 0.038
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Gage JL, Jarquin D, Romay C, Lorenz A, Buckler ES, Kaeppler S, Alkhalifah N, Bohn M, Campbell DA, Edwards J, Ertl D, Flint-Garcia S, Gardiner J, Good B, Hirsch CN, Holland J, Hooker DC, Knoll J, Kolkman J, Kruger G, Lauter N, Lawrence-Dill CJ, Lee E, Lynch J, Murray SC, Nelson R, Petzoldt J, Rocheford T, Schnable J, Schnable PS, Scully B, Smith M, Springer NM, Srinivasan S, Walton R, Weldekidan T, Wisser RJ, Xu W, Yu J, de Leon N. The effect of artificial selection on phenotypic plasticity in maize. Nat Commun. 2017 11 07; 8(1):1348.
Score: 0.033
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Postma JA, Kuppe C, Owen MR, Mellor N, Griffiths M, Bennett MJ, Lynch JP, Watt M. OpenSimRoot: widening the scope and application of root architectural models. New Phytol. 2017 Aug; 215(3):1274-1286.
Score: 0.032
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Burton AL, Johnson J, Foerster J, Hanlon MT, Kaeppler SM, Lynch JP, Brown KM. QTL mapping and phenotypic variation of root anatomical traits in maize (Zea mays L.). Theor Appl Genet. 2015 Jan; 128(1):93-106.
Score: 0.026