Crystal Hepp to Phylogeny
This is a "connection" page, showing publications Crystal Hepp has written about Phylogeny.
Connection Strength
1.990
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Sumampow TCP, Shekelle M, Beier P, Walker FM, Hepp CM. Identifying genetic relationships among tarsier populations in the islands of Bunaken National Park and mainland Sulawesi. PLoS One. 2020; 15(3):e0230014.
Score: 0.590
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Hepp CM, Cocking JH, Valentine M, Young SJ, Damian D, Samuels-Crow KE, Sheridan K, Fofanov VY, Furstenau TN, Busch JD, Erickson DE, Lancione RC, Smith K, Will J, Townsend J, Keim PS, Engelthaler DM. Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest. PLoS One. 2018; 13(11):e0205801.
Score: 0.538
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Bolyen E, Dillon MR, Bokulich NA, Ladner JT, Larsen BB, Hepp CM, Lemmer D, Sahl JW, Sanchez A, Holdgraf C, Sewell C, Choudhury AG, Stachurski J, McKay M, Engelthaler DM, Worobey M, Keim P, Caporaso JG. Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity. F1000Res. 2020; 9:657.
Score: 0.150
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Baker AL, Pearson T, Sahl JW, Hepp C, Price EP, Sarovich DS, Mayo M, Tuanyok A, Currie BJ, Keim P, Warner J. Burkholderia pseudomallei distribution in Australasia is linked to paleogeographic and anthropogenic history. PLoS One. 2018; 13(11):e0206845.
Score: 0.134
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Kaufman EL, Stone NE, Scoles GA, Hepp CM, Busch JD, Wagner DM. Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa. Parasit Vectors. 2018 05 18; 11(1):306.
Score: 0.130
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Hutton SM, Miarinjara A, Stone NE, Raharimalala FN, Raveloson AO, Rakotobe Harimanana R, Harimalala M, Rahelinirina S, McDonough RF, Ames AD, Hepp C, Rajerison M, Busch JD, Wagner DM, Girod R. Knockdown resistance mutations are common and widely distributed in Xenopsylla cheopis fleas that transmit plague in Madagascar. PLoS Negl Trop Dis. 2023 08; 17(8):e0011401.
Score: 0.047
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Bowers JR, Yaglom HD, Hepp CM, Pfeiffer A, Jasso-Selles D, Bratsch N, Nashio JT, Folkerts M, Wilbur SM, French C, Lemmer D, Fitzpatrick K, Huynh T, Komatsu K, McAuley JB, Close R, Engelthaler DM. Unique Genomic Epidemiology of COVID-19 in the White Mountain Apache Tribe, April to August 2020, Arizona. mSphere. 2023 04 20; 8(2):e0065922.
Score: 0.045
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Yaglom HD, Maurer M, Collins B, Hojnacki J, Monroy-Nieto J, Bowers JR, Packard S, Erickson DE, Barrand ZA, Simmons KM, Brock BN, Lim ES, Smith S, Hepp CM, Engelthaler DM. One health genomic surveillance and response to a university-based outbreak of the SARS-CoV-2 Delta AY.25 lineage, Arizona, 2021. PLoS One. 2022; 17(10):e0272830.
Score: 0.044
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Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona. mBio. 2020 09 04; 11(5).
Score: 0.038
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Pearson T, Sahl JW, Hepp CM, Handady K, Hornstra H, Vazquez AJ, Settles E, Mayo M, Kaestli M, Williamson CHD, Price EP, Sarovich DS, Cook JM, Wolken SR, Bowen RA, Tuanyok A, Foster JT, Drees KP, Kidd TJ, Bell SC, Currie BJ, Keim P. Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection. PLoS Pathog. 2020 03; 16(3):e1008298.
Score: 0.037
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Cocking JH, Deberg M, Schupp J, Sahl J, Wiggins K, Porty A, Hornstra HM, Hepp C, Jardine C, Furstenau TN, Schulte-Hostedde A, Fofanov VY, Pearson T. Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples. Genomics. 2020 03; 112(2):1872-1878.
Score: 0.036
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Fleshman A, Mullins K, Sahl J, Hepp C, Nieto N, Wiggins K, Hornstra H, Kelly D, Chan TC, Phetsouvanh R, Dittrich S, Panyanivong P, Paris D, Newton P, Richards A, Pearson T. Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity. Microb Genom. 2018 09; 4(9).
Score: 0.033
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Malukiewicz J, Hepp CM, Guschanski K, Stone AC. Phylogeny of the jacchus group of Callithrix marmosets based on complete mitochondrial genomes. Am J Phys Anthropol. 2017 01; 162(1):157-169.
Score: 0.029
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Barragan V, Chiriboga J, Miller E, Olivas S, Birdsell D, Hepp C, Hornstra H, Schupp JM, Morales M, Gonzalez M, Reyes S, de la Cruz C, Keim P, Hartskeerl R, Trueba G, Pearson T. High Leptospira Diversity in Animals and Humans Complicates the Search for Common Reservoirs of Human Disease in Rural Ecuador. PLoS Negl Trop Dis. 2016 09; 10(9):e0004990.
Score: 0.029
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Sahl JW, Lemmer D, Travis J, Schupp JM, Gillece JD, Aziz M, Driebe EM, Drees KP, Hicks ND, Williamson CHD, Hepp CM, Smith DE, Roe C, Engelthaler DM, Wagner DM, Keim P. NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats. Microb Genom. 2016 08; 2(8):e000074.
Score: 0.029
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Engelthaler DM, Roe CC, Hepp CM, Teixeira M, Driebe EM, Schupp JM, Gade L, Waddell V, Komatsu K, Arathoon E, Logemann H, Thompson GR, Chiller T, Barker B, Keim P, Litvintseva AP. Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever. mBio. 2016 Apr 26; 7(2):e00550-16.
Score: 0.028
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Keim P, Grunow R, Vipond R, Grass G, Hoffmaster A, Birdsell DN, Klee SR, Pullan S, Antwerpen M, Bayer BN, Latham J, Wiggins K, Hepp C, Pearson T, Brooks T, Sahl J, Wagner DM. Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years. EBioMedicine. 2015 Nov; 2(11):1613-8.
Score: 0.027
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Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS. Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus. PLoS One. 2015; 10(7):e0130955.
Score: 0.027